Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SUB1P1 Gene

Aliases for SUB1P1 Gene

  • SUB1 Homolog, Transcriptional Regulator Pseudogene 1 2 3 5
  • SUB1 Pseudogene 1 2 3
  • SUB1 Homolog (S. Cerevisiae) Pseudogene 1 2
  • SUB1 Homolog Pseudogene 1 3
  • HCG17750 3

External Ids for SUB1P1 Gene

Previous GeneCards Identifiers for SUB1P1 Gene

  • GC08P011683
  • GC00U922063
  • GC08P010578
  • GC08P011648
  • GC08P011651

Summaries for SUB1P1 Gene

GeneCards Summary for SUB1P1 Gene

SUB1P1 (SUB1 Homolog, Transcriptional Regulator Pseudogene 1) is a Pseudogene.

Additional gene information for SUB1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SUB1P1 Gene

Genomics for SUB1P1 Gene

Regulatory Elements for SUB1P1 Gene

Enhancers for SUB1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H011799 1.4 ENCODE dbSUPER 7.5 +14.9 14870 11 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 RPS3AP35 PINX1 FDFT1 DEFB135 LINC00208 ZNF705D ZNF705CP LINC00529 ENSG00000249316 OR7E10P
GH08H011789 0.5 ENCODE 12 -0.2 -244 1 ESRRA RFX1 PRDM1 FDFT1 SUB1P1 NEIL2 CTSB PIR57815
GH08H011747 0.2 dbSUPER 5.4 -40.8 -40762 2 LOC105379241 NEIL2 DEFB136 DEFB135 BLK ENSG00000255354 ENSG00000255518 FAM167A C8orf49 SUB1P1
GH08H011787 0.8 ENCODE 0.7 -2.0 -2013 0 CTCF PKNOX1 JUN ARID4B RAD21 FOSL1 CC2D1A CTBP1 MTA3 FOXK2 SUB1P1 PIR57815
GH08H011790 0.6 ENCODE 0.7 -1.7 -1706 0 MTA2 ARID4B MNT CC2D1A FOSL1 CTBP1 SKIL ATF7 ZNF600 SUB1P1 PIR57815
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SUB1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SUB1P1 Gene

Chromosome:
8
Start:
11,789,952 bp from pter
End:
11,791,085 bp from pter
Size:
1,134 bases
Orientation:
Plus strand

Genomic View for SUB1P1 Gene

Genes around SUB1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SUB1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SUB1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SUB1P1 Gene

Proteins for SUB1P1 Gene

Post-translational modifications for SUB1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SUB1P1 Gene

Domains & Families for SUB1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SUB1P1 Gene

Function for SUB1P1 Gene

Phenotypes From GWAS Catalog for SUB1P1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SUB1P1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SUB1P1 Gene

Localization for SUB1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SUB1P1 Gene

Pathways & Interactions for SUB1P1 Gene

SuperPathways for SUB1P1 Gene

No Data Available

Interacting Proteins for SUB1P1 Gene

Gene Ontology (GO) - Biological Process for SUB1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SUB1P1 Gene

Drugs & Compounds for SUB1P1 Gene

No Compound Related Data Available

Transcripts for SUB1P1 Gene

mRNA/cDNA for SUB1P1 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SUB1P1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for SUB1P1 Gene

No ASD Table

Relevant External Links for SUB1P1 Gene

GeneLoc Exon Structure for
SUB1P1
ECgene alternative splicing isoforms for
SUB1P1

Expression for SUB1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SUB1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SUB1P1 Gene:

SUB1P1
genes like me logo Genes that share expression patterns with SUB1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SUB1P1 Gene

Orthologs for SUB1P1 Gene

Evolution for SUB1P1 Gene

ENSEMBL:
Gene Tree for SUB1P1 (if available)
TreeFam:
Gene Tree for SUB1P1 (if available)

No data available for Orthologs for SUB1P1 Gene

Paralogs for SUB1P1 Gene

No data available for Paralogs for SUB1P1 Gene

Variants for SUB1P1 Gene

Relevant External Links for SUB1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SUB1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SUB1P1 Gene

Disorders for SUB1P1 Gene

No disorders were found for SUB1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SUB1P1 Gene

Publications for SUB1P1 Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 60

Products for SUB1P1 Gene

Sources for SUB1P1 Gene

Content
Loading form....