Aliases for STXBP5-AS1 Gene
Subcategory (RNA class) for STXBP5-AS1 Gene
non-coding RNA
Quality Score for this RNA gene is
3
Aliases for STXBP5-AS1 Gene
External Ids for STXBP5-AS1 Gene
- HGNC: 44183
- Entrez Gene: 729178
- Ensembl: ENSG00000233452
Previous GeneCards Identifiers for STXBP5-AS1 Gene
- GC06M147162
Summaries for STXBP5-AS1 Gene
GeneCards Summary for STXBP5-AS1 Gene
STXBP5-AS1 (STXBP5 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.
Additional gene information for STXBP5-AS1 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for STXBP5-AS1 Gene
Genomics for STXBP5-AS1 Gene
GeneHancer (GH) Regulatory Elements for STXBP5-AS1 Gene
Promoters and enhancers for STXBP5-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around STXBP5-AS1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for STXBP5-AS1 Gene
Genomic Locations for STXBP5-AS1 Gene
- chr6:146,841,388-147,204,614
- (GRCh38/hg38)
- Size:
- 363,227 bases
- Orientation:
- Minus strand
- chr6:147,162,524-147,525,750
- (GRCh37/hg19)
Genomic View for STXBP5-AS1 Gene
Genes around STXBP5-AS1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 6q24.3 by Ensembl
- 6q24.3 by Entrez Gene
- 6q24.3 by HGNC
STXBP5-AS1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)


RefSeq DNA sequence for STXBP5-AS1 Gene
Proteins for STXBP5-AS1 Gene
Post-translational modifications for STXBP5-AS1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for STXBP5-AS1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for STXBP5-AS1
- Origene Custom Protein Services for STXBP5-AS1
- Search GeneTex for Proteins for STXBP5-AS1
No data available for DME Specific Peptides for STXBP5-AS1 Gene
Domains & Families for STXBP5-AS1 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for STXBP5-AS1 Gene
Function for STXBP5-AS1 Gene
Phenotypes for STXBP5-AS1 Gene
- GenomeRNAi human phenotypes for STXBP5-AS1:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for STXBP5-AS1
-
- Search ViGene Biosciences for STXBP5-AS1
CRISPR Products
- Browse CRISPR knockouts for STXBP5-AS1
miRNA Products
- Search ViGene Biosciences for STXBP5-AS1
Inhibitory RNA Products
- Search ViGene Biosciences for STXBP5-AS1
Clone Products
- GenScript: Custom all cDNA clones Services for STXBP5-AS1
- VectorBuilder custom plasmid, inducible vectors for STXBP5-AS1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for STXBP5-AS1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for STXBP5-AS1 Gene
Localization for STXBP5-AS1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for STXBP5-AS1 Gene
Transcripts for STXBP5-AS1 Gene
mRNA/cDNA for STXBP5-AS1 Gene
- (5) Additional mRNA sequences :
- (9) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for STXBP5-AS1 Gene
CRISPR Products
- Browse CRISPR knockouts for STXBP5-AS1
miRNA Products
- Search ViGene Biosciences for STXBP5-AS1
Inhibitory RNA Products
- Search ViGene Biosciences for STXBP5-AS1
Clone Products
- GenScript: Custom all cDNA clones Services for STXBP5-AS1
- VectorBuilder custom plasmid, inducible vectors for STXBP5-AS1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for STXBP5-AS1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Relevant External Links for STXBP5-AS1 Gene
- GeneLoc Exon Structure for
- STXBP5-AS1
- ECgene alternative splicing isoforms for
- STXBP5-AS1
Expression for STXBP5-AS1 Gene
mRNA differential expression in normal tissues according to GTEx for STXBP5-AS1 Gene
This gene is overexpressed in Brain - Frontal Cortex (BA9) (x4.6) and Brain - Cortex (x4.1).
SOURCE GeneReport for Unigene cluster for STXBP5-AS1 Gene:
Hs.557608Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for STXBP5-AS1 Gene
Orthologs for STXBP5-AS1 Gene
Evolution for STXBP5-AS1 Gene
- ENSEMBL:
- Gene Tree for STXBP5-AS1 (if available)
- TreeFam:
- Gene Tree for STXBP5-AS1 (if available)
No data available for Orthologs for STXBP5-AS1 Gene
Paralogs for STXBP5-AS1 Gene
No data available for Paralogs for STXBP5-AS1 Gene
Variants for STXBP5-AS1 Gene
SNP ID | Clin | Chr 06 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
rs1000002924 | -- | 146,857,246(-) | A/G | intron_variant | |
rs1000014292 | -- | 147,027,143(-) | T/C | intron_variant | |
rs1000025807 | -- | 146,941,869(-) | T/C | intron_variant | |
rs1000032816 | -- | 147,051,138(-) | T/C | intron_variant | |
rs1000039610 | -- | 146,840,971(-) | C/T | downstream_transcript_variant |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
dgv1228e214 | CNV | loss | 21293372 |
esv2296134 | CNV | deletion | 18987734 |
esv2422007 | CNV | deletion | 20811451 |
esv2500763 | CNV | loss | 19546169 |
esv2609330 | CNV | deletion | 19546169 |
esv2657211 | CNV | deletion | 23128226 |
esv2659509 | CNV | deletion | 23128226 |
esv2732841 | CNV | deletion | 23290073 |
esv274984 | CNV | loss | 21479260 |
esv2760996 | CNV | gain | 21179565 |
esv2761057 | CNV | loss | 21179565 |
esv29555 | CNV | loss | 19812545 |
esv3611161 | CNV | loss | 21293372 |
esv3611162 | CNV | loss | 21293372 |
esv3611163 | CNV | loss | 21293372 |
esv3611164 | CNV | gain | 21293372 |
nsv1112908 | CNV | deletion | 24896259 |
nsv1161460 | CNV | duplication | 26073780 |
nsv1161461 | CNV | deletion | 26073780 |
nsv442012 | CNV | loss | 18776908 |
nsv442013 | CNV | loss | 18776908 |
nsv477245 | CNV | novel sequence insertion | 20440878 |
nsv514395 | CNV | loss | 21397061 |
nsv522096 | CNV | loss | 19592680 |
nsv5524 | CNV | deletion | 18451855 |
nsv823856 | CNV | loss | 20364138 |
nsv830838 | CNV | gain | 17160897 |
nsv949864 | CNV | duplication | 24416366 |
Additional Variant Information for STXBP5-AS1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- STXBP5-AS1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for STXBP5-AS1 Gene
Disorders for STXBP5-AS1 Gene
Additional Disease Information for STXBP5-AS1
No disorders were found for STXBP5-AS1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for STXBP5-AS1 Gene
Publications for STXBP5-AS1 Gene
- Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
Products for STXBP5-AS1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for STXBP5-AS1
- Origene Custom Protein Services for STXBP5-AS1
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- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for STXBP5-AS1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For STXBP5-AS1
- GenScript: Custom all cDNA clones Services for STXBP5-AS1
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- Browse GenScript CRISPR for STXBP5-AS1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
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- Plasmid Preparation
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- Browse Sino Biological cDNA Clones
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- Sino Biological Transfection Reagent
- Sino Biological Anti-His Tag Antibody
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Browse Antibodies at Cloud-Clone Corp.
- Browse Proteins at Cloud-Clone Corp.
- Browse Assay Kits at Cloud-Clone Corp.
- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for STXBP5-AS1
- VectorBuilder custom plasmid, inducible vectors for STXBP5-AS1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for STXBP5-AS1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for STXBP5-AS1
- Search GeneTex for Proteins for STXBP5-AS1
Sources for STXBP5-AS1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew