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Aliases for STX18-IT1 Gene

Subcategory (RNA class) for STX18-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for STX18-IT1 Gene

  • STX18 Intronic Transcript 1 2 3
  • STX18 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for STX18-IT1 Gene

Previous GeneCards Identifiers for STX18-IT1 Gene

  • GC00U933661

Summaries for STX18-IT1 Gene

GeneCards Summary for STX18-IT1 Gene

STX18-IT1 (STX18 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for STX18-IT1 Gene

Genomics for STX18-IT1 Gene

Genomic Location for STX18-IT1 Gene

Start:
4,476,121 bp from pter
End:
4,481,700 bp from pter
Size:
5,580 bases
Orientation:
Minus strand

Genomic View for STX18-IT1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for STX18-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for STX18-IT1 Gene

No data available for Regulatory Elements for STX18-IT1 Gene

Proteins for STX18-IT1 Gene

Post-translational modifications for STX18-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for STX18-IT1 Gene

Domains for STX18-IT1 Gene

Gene Families for STX18-IT1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with STX18-IT1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for STX18-IT1 Gene

Function for STX18-IT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for STX18-IT1 Gene

Localization for STX18-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for STX18-IT1 Gene

Pathways for STX18-IT1 Gene

SuperPathways for STX18-IT1 Gene

No Data Available

Interacting Proteins for STX18-IT1 Gene

Gene Ontology (GO) - Biological Process for STX18-IT1 Gene

None

No data available for Pathways by source for STX18-IT1 Gene

Transcripts for STX18-IT1 Gene

mRNA/cDNA for STX18-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for STX18-IT1 Gene

No ASD Table

Relevant External Links for STX18-IT1 Gene

GeneLoc Exon Structure for
STX18-IT1
ECgene alternative splicing isoforms for
STX18-IT1

Expression for STX18-IT1 Gene

mRNA expression in normal human tissues for STX18-IT1 Gene

genes like me logo Genes that share expressions with STX18-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for STX18-IT1 Gene

Orthologs for STX18-IT1 Gene

Evolution for STX18-IT1 Gene

ENSEMBL:
Gene Tree for STX18-IT1 (if available)
TreeFam:
Gene Tree for STX18-IT1 (if available)

No data available for Orthologs for STX18-IT1 Gene

Paralogs for STX18-IT1 Gene

No data available for Paralogs for STX18-IT1 Gene

Variants for STX18-IT1 Gene

Relevant External Links for STX18-IT1 Gene

HapMap Linkage Disequilibrium report
STX18-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for STX18-IT1 Gene

Disorders for STX18-IT1 Gene

No disorders were found for STX18-IT1 Gene.

No data available for UniProtKB/Swiss-Prot for STX18-IT1 Gene

Publications for STX18-IT1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for STX18-IT1 Gene

Sources for STX18-IT1 Gene

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