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Aliases for STRADBP1 Gene

Aliases for STRADBP1 Gene

  • STE20-Related Kinase Adaptor Beta Pseudogene 1 2 3 5
  • Amyotrophic Lateral Sclerosis 2 (Juvenile) Chromosome Region, Candidate 2 Pseudogene 3
  • ALS2CR2P1 3
  • STLK6ps1 3

External Ids for STRADBP1 Gene

Previous GeneCards Identifiers for STRADBP1 Gene

  • GC07M150212

Summaries for STRADBP1 Gene

GeneCards Summary for STRADBP1 Gene

STRADBP1 (STE20-Related Kinase Adaptor Beta Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for STRADBP1 Gene

Genomics for STRADBP1 Gene

Regulatory Elements for STRADBP1 Gene

Enhancers for STRADBP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F150555 1.5 FANTOM5 Ensembl ENCODE 12 -42.2 -42223 1.8 ZNF316 ZNF146 ATF3 NFE2 GIMAP1 GIMAP7 GIMAP4 GIMAP6 STRADBP1 GIMAP5 GIMAP2 GIMAP8 ALDH7A1P3
GH07F150674 1.5 FANTOM5 Ensembl ENCODE 11.9 -162.7 -162746 3.8 HDGF BCOR PKNOX1 SMAD5 MAFG ZIC2 ARID1B ZNF316 POLR2A STAT2 GIMAP1 GIMAP7 GIMAP4 GIMAP8 STRADBP1 GIMAP2 GIMAP5 GIMAP3P GIMAP6 EIF2AP3
GH07F150448 1.2 FANTOM5 ENCODE 11.7 +63.7 63732 4.4 HDGF PKNOX1 CBX3 TBL1XR1 BMI1 RAD21 ZNF143 ZMIZ1 CREM MIXL1 GIMAP8 GIMAP7 GIMAP1 GIMAP6 GIMAP5 STRADBP1 GIMAP2 GIMAP4 WDR86-AS1 TMEM176B
GH07F150452 0.2 ENCODE 11.7 +60.4 60376 1.8 MNT STRADBP1 GIMAP7 GIMAP1 GIMAP6 GIMAP8 EIF2AP1
GH07F150594 0.2 Ensembl 11.7 -81.0 -80954 0.4 GIMAP7 STRADBP1 GIMAP2 GC07M150567 EIF2AP2
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around STRADBP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for STRADBP1 Gene

Chromosome:
7
Start:
150,511,974 bp from pter
End:
150,514,047 bp from pter
Size:
2,074 bases
Orientation:
Minus strand

Genomic View for STRADBP1 Gene

Genes around STRADBP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
STRADBP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for STRADBP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for STRADBP1 Gene

Proteins for STRADBP1 Gene

Post-translational modifications for STRADBP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for STRADBP1 Gene

Domains & Families for STRADBP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for STRADBP1 Gene

Function for STRADBP1 Gene

Phenotypes for STRADBP1 Gene

GenomeRNAi human phenotypes for STRADBP1:
genes like me logo Genes that share phenotypes with STRADBP1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for STRADBP1 Gene

Localization for STRADBP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for STRADBP1 Gene

Pathways & Interactions for STRADBP1 Gene

SuperPathways for STRADBP1 Gene

No Data Available

Interacting Proteins for STRADBP1 Gene

Gene Ontology (GO) - Biological Process for STRADBP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for STRADBP1 Gene

Transcripts for STRADBP1 Gene

mRNA/cDNA for STRADBP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for STRADBP1 Gene

No ASD Table

Relevant External Links for STRADBP1 Gene

GeneLoc Exon Structure for
STRADBP1
ECgene alternative splicing isoforms for
STRADBP1

Expression for STRADBP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for STRADBP1 Gene

mRNA differential expression in normal tissues according to GTEx for STRADBP1 Gene

This gene is overexpressed in Whole Blood (x6.9) and Muscle - Skeletal (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of STRADBP1 Gene:

STRADBP1
genes like me logo Genes that share expression patterns with STRADBP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for STRADBP1 Gene

Orthologs for STRADBP1 Gene

Evolution for STRADBP1 Gene

ENSEMBL:
Gene Tree for STRADBP1 (if available)
TreeFam:
Gene Tree for STRADBP1 (if available)

No data available for Orthologs for STRADBP1 Gene

Paralogs for STRADBP1 Gene

No data available for Paralogs for STRADBP1 Gene

Variants for STRADBP1 Gene

Relevant External Links for STRADBP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
STRADBP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for STRADBP1 Gene

Disorders for STRADBP1 Gene

No disorders were found for STRADBP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for STRADBP1 Gene

Publications for STRADBP1 Gene

  1. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3 64
  2. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3 64

Products for STRADBP1 Gene

Sources for STRADBP1 Gene

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