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Aliases for STPG2-AS1 Gene

Subcategory (RNA class) for STPG2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for STPG2-AS1 Gene

  • STPG2 Antisense RNA 1 2 3 5
  • STPG2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for STPG2-AS1 Gene

Previous GeneCards Identifiers for STPG2-AS1 Gene

  • GC04P098289

Summaries for STPG2-AS1 Gene

GeneCards Summary for STPG2-AS1 Gene

STPG2-AS1 (STPG2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for STPG2-AS1 Gene

Genomics for STPG2-AS1 Gene

Genomic Location for STPG2-AS1 Gene

Chromosome:
4
Start:
97,366,926 bp from pter
End:
97,490,164 bp from pter
Size:
123,239 bases
Orientation:
Plus strand

Genomic View for STPG2-AS1 Gene

Genes around STPG2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
STPG2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for STPG2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for STPG2-AS1 Gene

No data available for Regulatory Elements for STPG2-AS1 Gene

Proteins for STPG2-AS1 Gene

Post-translational modifications for STPG2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for STPG2-AS1 Gene

Domains & Families for STPG2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for STPG2-AS1 Gene

Function for STPG2-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for STPG2-AS1 Gene

Localization for STPG2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for STPG2-AS1 Gene

Pathways & Interactions for STPG2-AS1 Gene

SuperPathways for STPG2-AS1 Gene

No Data Available

Interacting Proteins for STPG2-AS1 Gene

Gene Ontology (GO) - Biological Process for STPG2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for STPG2-AS1 Gene

Drugs & Compounds for STPG2-AS1 Gene

No Compound Related Data Available

Transcripts for STPG2-AS1 Gene

mRNA/cDNA for STPG2-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for STPG2-AS1 Gene

No ASD Table

Relevant External Links for STPG2-AS1 Gene

GeneLoc Exon Structure for
STPG2-AS1
ECgene alternative splicing isoforms for
STPG2-AS1

Expression for STPG2-AS1 Gene

mRNA expression in normal human tissues for STPG2-AS1 Gene

genes like me logo Genes that share expression patterns with STPG2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for STPG2-AS1 Gene

Orthologs for STPG2-AS1 Gene

Evolution for STPG2-AS1 Gene

ENSEMBL:
Gene Tree for STPG2-AS1 (if available)
TreeFam:
Gene Tree for STPG2-AS1 (if available)

No data available for Orthologs for STPG2-AS1 Gene

Paralogs for STPG2-AS1 Gene

No data available for Paralogs for STPG2-AS1 Gene

Variants for STPG2-AS1 Gene

Sequence variations from dbSNP and Humsavar for STPG2-AS1 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs1350970 -- 97,370,523(-) AACAT(G/T)TAGCT intron-variant
rs1350971 -- 97,370,228(-) actca(A/G)aattg intron-variant
rs1121215 -- 97,385,895(-) cttgt(A/C)attga intron-variant
rs1398315 -- 97,377,093(-) tcact(C/T)tctct intron-variant
rs1398316 -- 97,394,869(-) CTCAT(C/G)ATGAA intron-variant

Relevant External Links for STPG2-AS1 Gene

HapMap Linkage Disequilibrium report
STPG2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for STPG2-AS1 Gene

Disorders for STPG2-AS1 Gene

Relevant External Links for STPG2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
STPG2-AS1

No disorders were found for STPG2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for STPG2-AS1 Gene

Publications for STPG2-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 67

Products for STPG2-AS1 Gene

Sources for STPG2-AS1 Gene

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