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Aliases for STOX1 Gene

Aliases for STOX1 Gene

  • Storkhead Box 1 2 3
  • Winged-Helix Domain-Containing Protein 3 4
  • C10orf24 3 4
  • PEE4 3 6
  • Chromosome 10 Open Reading Frame 24 2
  • Storkhead-Box Protein 1 3

External Ids for STOX1 Gene

Previous HGNC Symbols for STOX1 Gene

  • C10orf24

Previous GeneCards Identifiers for STOX1 Gene

  • GC10P070258
  • GC10P070587
  • GC10P064588

Summaries for STOX1 Gene

Entrez Gene Summary for STOX1 Gene

  • The protein encoded by this gene may function as a DNA binding protein. Mutations in this gene are associated with pre-eclampsia/eclampsia 4 (PEE4). Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2009]

GeneCards Summary for STOX1 Gene

STOX1 (Storkhead Box 1) is a Protein Coding gene. Diseases associated with STOX1 include preeclampsia/eclampsia 4 and eclampsia. An important paralog of this gene is STOX2.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for STOX1 Gene

Genomics for STOX1 Gene

Regulatory Elements for STOX1 Gene

Transcription factor binding sites by QIAGEN in the STOX1 gene promoter:

Genomic Location for STOX1 Gene

Start:
68,827,537 bp from pter
End:
68,900,395 bp from pter
Size:
72,859 bases
Orientation:
Plus strand

Genomic View for STOX1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for STOX1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for STOX1 Gene

Proteins for STOX1 Gene

  • Protein details for STOX1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZVD7-STOX1_HUMAN
    Recommended name:
    Storkhead-box protein 1
    Protein Accession:
    Q6ZVD7
    Secondary Accessions:
    • A2A3Q9
    • A5D6Y7
    • B0QZA4
    • B0QZA5
    • B0QZA6
    • Q4F8Q6
    • Q5I946
    • Q5I947
    • Q5I948
    • Q5VX38
    • Q5VX39
    • Q6ZRY3
    • Q96LR3
    • Q96LS0

    Protein attributes for STOX1 Gene

    Size:
    989 amino acids
    Molecular mass:
    110962 Da
    Quaternary structure:
    • Binds DNA.
    SequenceCaution:
    • Sequence=AAH63627.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=BAB71600.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=BAB71607.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=BAC85925.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=BAC87173.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for STOX1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for STOX1 Gene

Proteomics data for STOX1 Gene at MOPED

Post-translational modifications for STOX1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for STOX1 Gene

No data available for DME Specific Peptides for STOX1 Gene

Domains for STOX1 Gene

Protein Domains for STOX1 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for STOX1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with STOX1: view

No data available for Gene Families and UniProtKB/Swiss-Prot for STOX1 Gene

Function for STOX1 Gene

Gene Ontology (GO) - Molecular Function for STOX1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IDA 22253775
GO:0003677 DNA binding --
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with STOX1: view

Animal Model Products

CRISPR Products

miRNA for STOX1 Gene

miRTarBase miRNAs that target STOX1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for STOX1 Gene

Localization for STOX1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for STOX1 Gene

Isoform A: Cytoplasm. Nucleus. Note=Either found in the cytoplasm or in the nucleus. Nuclear expression of isoform A seems to be restricted to polyploid trophoblast cells.
Isoform B: Nucleus.
Isoform C: Nucleus, nucleolus.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for STOX1 Gene COMPARTMENTS Subcellular localization image for STOX1 gene
Compartment Confidence
nucleus 5
cytosol 3
mitochondrion 2
extracellular 1

Gene Ontology (GO) - Cellular Components for STOX1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA --
GO:0005654 nucleoplasm IDA --
GO:0005730 nucleolus IDA --
GO:0005737 cytoplasm IDA --
GO:0005813 centrosome IDA 22253775
genes like me logo Genes that share ontologies with STOX1: view

Pathways for STOX1 Gene

SuperPathways for STOX1 Gene

No Data Available

Interacting Proteins for STOX1 Gene

STRING Interaction Network Preview (showing 3 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000298596%0d%0a9606.ENSP00000344818%0d%0a9606.ENSP00000234160%0d%0a9606.ENSP00000359258%0d%0a
Selected Interacting proteins: ENSP00000298596 Q6ZVD7-STOX1_HUMAN for STOX1 Gene via STRING UniProtKB

Gene Ontology (GO) - Biological Process for STOX1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008284 positive regulation of cell proliferation IMP 22253775
GO:0010628 positive regulation of gene expression IMP 22253775
GO:0010629 negative regulation of gene expression IMP 22253775
GO:0010800 positive regulation of peptidyl-threonine phosphorylation IMP 22995177
GO:0010971 positive regulation of G2/M transition of mitotic cell cycle IMP 22253775
genes like me logo Genes that share ontologies with STOX1: view

No data available for Pathways by source for STOX1 Gene

Transcripts for STOX1 Gene

Unigene Clusters for STOX1 Gene

Storkhead box 1:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for STOX1

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for STOX1
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for STOX1 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b ^ 5a · 5b ^ 6
SP1: -
SP2: -
SP3:
SP4: -
SP5: - -

Relevant External Links for STOX1 Gene

GeneLoc Exon Structure for
STOX1
ECgene alternative splicing isoforms for
STOX1

Expression for STOX1 Gene

mRNA expression in normal human tissues for STOX1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for STOX1 Gene

This gene is overexpressed in Brain - Amygdala (5.2), Brain - Nucleus accumbens (basal ganglia) (4.4), and Brain - Caudate (basal ganglia) (4.2).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for STOX1 Gene

SOURCE GeneReport for Unigene cluster for STOX1 Gene Hs.37636

genes like me logo Genes that share expressions with STOX1: view

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt for STOX1 Gene

Orthologs for STOX1 Gene

This gene was present in the common ancestor of animals.

Orthologs for STOX1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia STOX1 35
  • 99.39 (n)
  • 99.19 (a)
STOX1 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia STOX1 35
  • 83.93 (n)
  • 75.08 (a)
STOX1 36
  • 74 (a)
OneToOne
dog
(Canis familiaris)
Mammalia STOX1 35
  • 82.45 (n)
  • 72.93 (a)
STOX1 36
  • 71 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Stox1 35
  • 71.22 (n)
  • 61.33 (a)
Stox1 16
Stox1 36
  • 60 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia STOX1 36
  • 46 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia STOX1 36
  • 41 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Stox1 35
  • 71.41 (n)
  • 60.68 (a)
chicken
(Gallus gallus)
Aves STOX1 35
  • 53.6 (n)
  • 38.3 (a)
STOX1 36
  • 32 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia STOX1 36
  • 38 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia stox1 35
  • 54.94 (n)
  • 44.95 (a)
zebrafish
(Danio rerio)
Actinopterygii -- 35
stox1 35
  • 50.62 (n)
  • 39.54 (a)
stox1 36
  • 33 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta ko 36
  • 14 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea ham-1 36
  • 21 (a)
OneToMany
Species with no ortholog for STOX1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for STOX1 Gene

ENSEMBL:
Gene Tree for STOX1 (if available)
TreeFam:
Gene Tree for STOX1 (if available)

Paralogs for STOX1 Gene

Paralogs for STOX1 Gene

genes like me logo Genes that share paralogs with STOX1: view

Variants for STOX1 Gene

Sequence variations from dbSNP and Humsavar for STOX1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs3482 -- 68,892,952(-) TATAC(G/T)CCCAA utr-variant-3-prime, intron-variant
rs884181 -- 68,826,702(+) CCAGG(C/T)AAGCG upstream-variant-2KB
rs947388 -- 68,889,218(-) gaagc(A/G)ggaga intron-variant
rs1007042 -- 68,857,217(-) TCATC(A/C)TACCA intron-variant
rs1149681 -- 68,862,754(-) cataa(A/C)ctgca intron-variant

Structural Variations from Database of Genomic Variants (DGV) for STOX1 Gene

Variant ID Type Subtype PubMed ID
dgv296e1 CNV Complex 17122850
esv2590445 CNV Deletion 19546169
esv22950 CNV Loss 19812545
esv1165433 CNV Deletion 17803354
nsv437688 CNV Loss 16327808
dgv151e199 CNV Deletion 23128226
nsv8685 CNV Loss 18304495
esv25403 CNV Loss 19812545
nsv442191 CNV CNV 18776908
nsv516725 CNV Loss 19592680
nsv818773 CNV Loss 17921354
nsv831907 CNV Gain 17160897
esv2738062 CNV Deletion 23290073
esv2738073 CNV Deletion 23290073
esv1719721 CNV Deletion 17803354

Relevant External Links for STOX1 Gene

HapMap Linkage Disequilibrium report
STOX1
Human Gene Mutation Database (HGMD)
STOX1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for STOX1 Gene

Disorders for STOX1 Gene

MalaCards: The human disease database

MalaCards: The human disease database. (4) Diseases for STOX1 Gene including...

Search for STOX1 Gene in MalaCards »

(1) OMIM Diseases for STOX1 Gene (609397)

UniProtKB/Swiss-Prot

STOX1_HUMAN
  • Pre-eclampsia/eclampsia 4 (PEE4) [MIM:609404]: A hypertensive disorder of pregnancy characterized by new hypertension (blood pressure 140/90 or greater) presenting after 20 weeks gestation with clinically relevant proteinuria. It impacts 2 individuals, the mother and her child, both of whom can be severely affected. Preeclampsia is one of the causes of maternal mortality and morbidity worldwide. {ECO:0000269 PubMed:15806103}. Note=The disease is caused by mutations affecting the gene represented in this entry.

(1) University of Copenhagen DISEASES for STOX1 Gene

Relevant External Links for STOX1

Genetic Association Database (GAD)
STOX1
Human Genome Epidemiology (HuGE) Navigator
STOX1
genes like me logo Genes that share disorders with STOX1: view

Publications for STOX1 Gene

  1. Maternal segregation of the Dutch preeclampsia locus at 10q22 with a new member of the winged helix gene family. (PMID: 15806103) van Dijk M. … Oudejans C.B.M. (Nat. Genet. 2005) 3 4 23
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P. … Rogers J. (Nature 2004) 3 4
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  5. Evaluation of STOX1 as a preeclampsia candidate gene in a population-wide sample. (PMID: 17290274) Kivinen K. … Kere J. (Eur. J. Hum. Genet. 2007) 3 48

Products for STOX1 Gene

Sources for STOX1 Gene

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