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Aliases for STK4-AS1 Gene

Subcategory (RNA class) for STK4-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for STK4-AS1 Gene

  • STK4 Antisense RNA 1 (Head To Head) 2 3
  • STK4 Antisense RNA 1 (Non-Protein Coding) 2
  • STK4 Antisense RNA 1 2

External Ids for STK4-AS1 Gene

Previous GeneCards Identifiers for STK4-AS1 Gene

  • GC20M043594

Summaries for STK4-AS1 Gene

GeneCards Summary for STK4-AS1 Gene

STK4-AS1 (STK4 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for STK4-AS1 Gene

Genomics for STK4-AS1 Gene

Genomic Location for STK4-AS1 Gene

Chromosome:
20
Start:
44,963,794 bp from pter
End:
44,966,458 bp from pter
Size:
2,665 bases
Orientation:
Minus strand

Genomic View for STK4-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for STK4-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for STK4-AS1 Gene

No data available for Regulatory Elements for STK4-AS1 Gene

Proteins for STK4-AS1 Gene

Post-translational modifications for STK4-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for STK4-AS1 Gene

Domains & Families for STK4-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for STK4-AS1 Gene

Function for STK4-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for STK4-AS1 Gene

Localization for STK4-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for STK4-AS1 Gene

Pathways & Interactions for STK4-AS1 Gene

SuperPathways for STK4-AS1 Gene

No Data Available

Interacting Proteins for STK4-AS1 Gene

Gene Ontology (GO) - Biological Process for STK4-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for STK4-AS1 Gene

Drugs & Compounds for STK4-AS1 Gene

No Compound Related Data Available

Transcripts for STK4-AS1 Gene

mRNA/cDNA for STK4-AS1 Gene

(2) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for STK4-AS1 Gene

STK4 antisense RNA 1 (head to head):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for STK4-AS1 Gene

No ASD Table

Relevant External Links for STK4-AS1 Gene

GeneLoc Exon Structure for
STK4-AS1
ECgene alternative splicing isoforms for
STK4-AS1

Expression for STK4-AS1 Gene

mRNA expression in normal human tissues for STK4-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for STK4-AS1 Gene

This gene is overexpressed in Testis (x19.1).

SOURCE GeneReport for Unigene cluster for STK4-AS1 Gene Hs.196065

genes like me logo Genes that share expression patterns with STK4-AS1: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for STK4-AS1 Gene

Orthologs for STK4-AS1 Gene

Evolution for STK4-AS1 Gene

ENSEMBL:
Gene Tree for STK4-AS1 (if available)
TreeFam:
Gene Tree for STK4-AS1 (if available)

No data available for Orthologs for STK4-AS1 Gene

Paralogs for STK4-AS1 Gene

No data available for Paralogs for STK4-AS1 Gene

Variants for STK4-AS1 Gene

Sequence variations from dbSNP and Humsavar for STK4-AS1 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs778568595 -- 44,963,823(+) AGATA(C/T)AACTC nc-transcript-variant
rs776556020 -- 44,963,363(+) CTTGG(C/T)TCTCC downstream-variant-500B
rs775824284 -- 44,963,893(+) CTACA(A/G)CCAAT nc-transcript-variant
rs773532847 -- 44,963,511(+) TGGAC(A/T)GGGCT downstream-variant-500B
rs766420447 -- 44,963,583(+) GTAGA(A/T)TTCTG downstream-variant-500B

Relevant External Links for STK4-AS1 Gene

HapMap Linkage Disequilibrium report
STK4-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for STK4-AS1 Gene

Disorders for STK4-AS1 Gene

Relevant External Links for STK4-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
STK4-AS1
genes like me logo Genes that share disorders with STK4-AS1: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for STK4-AS1 Gene

Publications for STK4-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 67

Products for STK4-AS1 Gene

Sources for STK4-AS1 Gene

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