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Aliases for STK24-AS1 Gene

Subcategory (RNA class) for STK24-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for STK24-AS1 Gene

  • STK24 Antisense RNA 1 2 3 5
  • STK24 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for STK24-AS1 Gene

Previous GeneCards Identifiers for STK24-AS1 Gene

  • GC00U933634
  • GC13P099230

Summaries for STK24-AS1 Gene

GeneCards Summary for STK24-AS1 Gene

STK24-AS1 (STK24 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for STK24-AS1 Gene

Genomics for STK24-AS1 Gene

Regulatory Elements for STK24-AS1 Gene

Enhancers for STK24-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F098927 0.6 Ensembl ENCODE 37.5 +351.1 351067 1.4 SOX13 ZFP64 ZNF140 ZBTB40 ZNF101 ZNF664 PRDM10 ZNF433 SOX5 ZNF202 STK24-AS1 DOCK9 TM9SF2 DOCK9-AS2 DOCK9-AS1 HMGB3P4 GC13M098916 RPL7L1P12
GH13F098547 0.7 Ensembl ENCODE 36.1 -28.2 -28160 3.4 PKNOX1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF143 FOS SP3 STK24-AS1 STK24 RN7SKP9 TM9SF2 HMGB3P4 ENSG00000271437 GC13P098445
GH13F098527 0.2 Ensembl 31.2 -49.6 -49598 0.4 RING1 RAD51 STK24-AS1 STK24 ENSG00000271437 GC13P098445
GH13F098528 0.6 Ensembl 31.2 -48.4 -48398 1.6 RING1 SCRT1 SCRT2 IKZF1 EED JUNB ZNF600 STK24-AS1 STK24 ENSG00000271437 GC13P098445
GH13F099198 0.2 ENCODE 23.3 +623.5 623451 5.1 PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 SP3 SP5 LINC00554 STK24-AS1 RN7SKP9 LINC01039 CFL1P8 TM9SF2 HMGB3P4 UBAC2 GPR18 UBAC2-AS1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around STK24-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for STK24-AS1 Gene

Chromosome:
13
Start:
98,577,198 bp from pter
End:
98,578,842 bp from pter
Size:
1,645 bases
Orientation:
Plus strand

Genomic View for STK24-AS1 Gene

Genes around STK24-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
STK24-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for STK24-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for STK24-AS1 Gene

Proteins for STK24-AS1 Gene

Post-translational modifications for STK24-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for STK24-AS1 Gene

Domains & Families for STK24-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for STK24-AS1 Gene

Function for STK24-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for STK24-AS1 Gene

Localization for STK24-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for STK24-AS1 Gene

Pathways & Interactions for STK24-AS1 Gene

SuperPathways for STK24-AS1 Gene

No Data Available

Interacting Proteins for STK24-AS1 Gene

Gene Ontology (GO) - Biological Process for STK24-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for STK24-AS1 Gene

Transcripts for STK24-AS1 Gene

mRNA/cDNA for STK24-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for STK24-AS1 Gene

No ASD Table

Relevant External Links for STK24-AS1 Gene

GeneLoc Exon Structure for
STK24-AS1
ECgene alternative splicing isoforms for
STK24-AS1

Expression for STK24-AS1 Gene

mRNA expression in normal human tissues for STK24-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for STK24-AS1 Gene

This gene is overexpressed in Pituitary (x4.7).
genes like me logo Genes that share expression patterns with STK24-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for STK24-AS1 Gene

Orthologs for STK24-AS1 Gene

Evolution for STK24-AS1 Gene

ENSEMBL:
Gene Tree for STK24-AS1 (if available)
TreeFam:
Gene Tree for STK24-AS1 (if available)

No data available for Orthologs for STK24-AS1 Gene

Paralogs for STK24-AS1 Gene

No data available for Paralogs for STK24-AS1 Gene

Variants for STK24-AS1 Gene

Sequence variations from dbSNP and Humsavar for STK24-AS1 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1113472 -- 98,575,586(+) AAGAG(A/G)CGAGC intron-variant, upstream-variant-2KB
rs112009595 -- 98,576,090(+) CTGGT(G/T)CGCGG intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs112823290 -- 98,577,964(+) CGCCT(C/T)CTCTC nc-transcript-variant, upstream-variant-2KB
rs11843789 -- 98,578,551(+) GAATG(C/T)Gaatc nc-transcript-variant, upstream-variant-2KB
rs12872976 -- 98,576,519(+) GGCCG(C/T)GGTTC intron-variant, upstream-variant-2KB, utr-variant-5-prime

Relevant External Links for STK24-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
STK24-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for STK24-AS1 Gene

Disorders for STK24-AS1 Gene

Relevant External Links for STK24-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
STK24-AS1

No disorders were found for STK24-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for STK24-AS1 Gene

Publications for STK24-AS1 Gene

  1. An evaluation of the assembly of an approximately 15-Mb region on human chromosome 13q32-q33 linked to bipolar disorder and schizophrenia. (PMID: 11991713) Christian S.L. … Gershon E.S. (Genomics 2002) 3 64

Products for STK24-AS1 Gene

Sources for STK24-AS1 Gene

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