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Aliases for STK24-AS1 Gene

Subcategory (RNA class) for STK24-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for STK24-AS1 Gene

  • STK24 Antisense RNA 1 2 3 5
  • STK24 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for STK24-AS1 Gene

Previous GeneCards Identifiers for STK24-AS1 Gene

  • GC00U933634
  • GC13P099230

Summaries for STK24-AS1 Gene

GeneCards Summary for STK24-AS1 Gene

STK24-AS1 (STK24 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for STK24-AS1 Gene

Genomics for STK24-AS1 Gene

Regulatory Elements for STK24-AS1 Gene

Enhancers for STK24-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13G098482 2 FANTOM5 Ensembl ENCODE dbSUPER 22.3 -91.9 -91851 5.9 FOXA2 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF143 FOS DEK STK24-AS1 STK24 DOCK9-AS1 DOCK9 GC13P098445 ENSG00000271437
GH13G098506 1.6 Ensembl ENCODE dbSUPER 23.7 -67.8 -67773 6.8 HDGF FOXA2 MLX ARNT ZFP64 WRNIP1 ARID4B FEZF1 DMAP1 ZNF2 STK24-AS1 STK24 ENSG00000271437 GC13P098445
GH13G098527 0.7 dbSUPER 39.7 -47.3 -47347 4.4 RING1 ZNF211 PKNOX1 ZNF2 ZBTB7B ZNF155 ZNF547 EED ZNF26 SCRT2 STK24-AS1 STK24 ENSG00000271437 GC13P098445
GH13G098475 1.9 FANTOM5 Ensembl ENCODE dbSUPER 12 -99.9 -99859 3.9 HDGF PKNOX1 FOXA2 ARID4B YY1 ETS1 TCF12 GATA2 ELK1 ZNF143 STK24 STK24-AS1 GC13P098445 ENSG00000271437
GH13G098547 1.6 Ensembl ENCODE dbSUPER 12.9 -28.2 -28160 3.4 PKNOX1 FOXA2 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF143 FOS STK24 STK24-AS1 ENSG00000271437 GC13P098445
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around STK24-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for STK24-AS1 Gene

Chromosome:
13
Start:
98,577,198 bp from pter
End:
98,578,842 bp from pter
Size:
1,645 bases
Orientation:
Plus strand

Genomic View for STK24-AS1 Gene

Genes around STK24-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
STK24-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for STK24-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for STK24-AS1 Gene

Proteins for STK24-AS1 Gene

Post-translational modifications for STK24-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for STK24-AS1 Gene

Domains & Families for STK24-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for STK24-AS1 Gene

Function for STK24-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for STK24-AS1 Gene

Localization for STK24-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for STK24-AS1 Gene

Pathways & Interactions for STK24-AS1 Gene

SuperPathways for STK24-AS1 Gene

No Data Available

Interacting Proteins for STK24-AS1 Gene

Gene Ontology (GO) - Biological Process for STK24-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for STK24-AS1 Gene

Drugs & Compounds for STK24-AS1 Gene

No Compound Related Data Available

Transcripts for STK24-AS1 Gene

mRNA/cDNA for STK24-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for STK24-AS1 Gene

No ASD Table

Relevant External Links for STK24-AS1 Gene

GeneLoc Exon Structure for
STK24-AS1
ECgene alternative splicing isoforms for
STK24-AS1

Expression for STK24-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for STK24-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for STK24-AS1 Gene

This gene is overexpressed in Pituitary (x4.7).
genes like me logo Genes that share expression patterns with STK24-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for STK24-AS1 Gene

Orthologs for STK24-AS1 Gene

Evolution for STK24-AS1 Gene

ENSEMBL:
Gene Tree for STK24-AS1 (if available)
TreeFam:
Gene Tree for STK24-AS1 (if available)

No data available for Orthologs for STK24-AS1 Gene

Paralogs for STK24-AS1 Gene

No data available for Paralogs for STK24-AS1 Gene

Variants for STK24-AS1 Gene

Sequence variations from dbSNP and Humsavar for STK24-AS1 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1000312956 -- 98,575,975(+) GGTAG(G/T)CCAAG intron-variant, upstream-variant-2KB
rs1001192004 -- 98,577,683(+) TAATT(C/T)CTAGT intron-variant, upstream-variant-2KB
rs1001872107 -- 98,577,890(+) CAGCC(C/G)TCTCC intron-variant, upstream-variant-2KB
rs1002601626 -- 98,578,964(+) GTCAC(A/G)TGAGC downstream-variant-500B, upstream-variant-2KB
rs1003265765 -- 98,576,859(+) GCCCG(A/C/T)GGGCC upstream-variant-2KB, utr-variant-5-prime

Relevant External Links for STK24-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
STK24-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for STK24-AS1 Gene

Disorders for STK24-AS1 Gene

Relevant External Links for STK24-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
STK24-AS1

No disorders were found for STK24-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for STK24-AS1 Gene

Publications for STK24-AS1 Gene

  1. An evaluation of the assembly of an approximately 15-Mb region on human chromosome 13q32-q33 linked to bipolar disorder and schizophrenia. (PMID: 11991713) Christian S.L. … Gershon E.S. (Genomics 2002) 3 64

Products for STK24-AS1 Gene

Sources for STK24-AS1 Gene

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