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Aliases for STK24-AS1 Gene

Subcategory (RNA class) for STK24-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for STK24-AS1 Gene

  • STK24 Antisense RNA 1 2 3 5
  • STK24 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for STK24-AS1 Gene

Previous GeneCards Identifiers for STK24-AS1 Gene

  • GC00U933634
  • GC13P099230

Summaries for STK24-AS1 Gene

GeneCards Summary for STK24-AS1 Gene

STK24-AS1 (STK24 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for STK24-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for STK24-AS1 Gene

Genomics for STK24-AS1 Gene

GeneHancer (GH) Regulatory Elements for STK24-AS1 Gene

Promoters and enhancers for STK24-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I098578 Enhancer 0.4 ENCODE dbSUPER 550.8 +1.8 1844 0.2 STK24 STK24-AS1 GC13M098584
GH13I099198 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 32.5 +623.5 623451 5.1 PKNOX1 SMAD1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B ZNF213 UBAC2 UBAC2-AS1 STK24-AS1 GPR18
GH13I098482 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 31.6 -91.9 -91850 5.9 FOXA2 ARID4B NEUROD1 SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF143 FOS STK24-AS1 STK24 DOCK9-AS1 DOCK9 GC13P098445 ENSG00000271437
GH13I098506 Enhancer 1.5 Ensembl ENCODE dbSUPER 34.1 -67.8 -67772 6.8 HDGF FOXA2 SMAD1 MLX ARNT ZFP64 ARID4B FEZF1 DMAP1 ZNF2 STK24-AS1 STK24 FARP1 ENSG00000271437 GC13P098445
GH13I098737 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 14 +168.2 168161 15.7 PKNOX1 ZFP64 ZSCAN4 ZNF133 ZBTB40 RAD21 RARA YY1 ZNF335 SCRT2 SLC15A1 STK24-AS1 DOCK9-AS2 RN7SL60P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around STK24-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for STK24-AS1 Gene

Genomic Locations for STK24-AS1 Gene
chr13:98,577,198-98,578,842
(GRCh38/hg38)
Size:
1,645 bases
Orientation:
Plus strand
chr13:99,229,498-99,231,084
(GRCh37/hg19)

Genomic View for STK24-AS1 Gene

Genes around STK24-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
STK24-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for STK24-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for STK24-AS1 Gene

Proteins for STK24-AS1 Gene

Post-translational modifications for STK24-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for STK24-AS1 Gene

Domains & Families for STK24-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for STK24-AS1 Gene

Function for STK24-AS1 Gene

Phenotypes From GWAS Catalog for STK24-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for STK24-AS1 Gene

Localization for STK24-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for STK24-AS1 Gene

Pathways & Interactions for STK24-AS1 Gene

SuperPathways for STK24-AS1 Gene

No Data Available

Interacting Proteins for STK24-AS1 Gene

Gene Ontology (GO) - Biological Process for STK24-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for STK24-AS1 Gene

Drugs & Compounds for STK24-AS1 Gene

No Compound Related Data Available

Transcripts for STK24-AS1 Gene

mRNA/cDNA for STK24-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for STK24-AS1 Gene

No ASD Table

Relevant External Links for STK24-AS1 Gene

GeneLoc Exon Structure for
STK24-AS1
ECgene alternative splicing isoforms for
STK24-AS1

Expression for STK24-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for STK24-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for STK24-AS1 Gene

This gene is overexpressed in Pituitary (x4.7).
genes like me logo Genes that share expression patterns with STK24-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for STK24-AS1 Gene

Orthologs for STK24-AS1 Gene

Evolution for STK24-AS1 Gene

ENSEMBL:
Gene Tree for STK24-AS1 (if available)
TreeFam:
Gene Tree for STK24-AS1 (if available)

No data available for Orthologs for STK24-AS1 Gene

Paralogs for STK24-AS1 Gene

No data available for Paralogs for STK24-AS1 Gene

Variants for STK24-AS1 Gene

Sequence variations from dbSNP and Humsavar for STK24-AS1 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000312956 -- 98,575,975(+) G/T upstream_transcript_variant
rs1001192004 -- 98,577,683(+) C/T intron_variant
rs1001872107 -- 98,577,890(+) C/G intron_variant
rs1002601626 -- 98,578,964(+) G/A downstream_transcript_variant
rs1003265765 -- 98,576,859(+) C/A/T upstream_transcript_variant

Additional Variant Information for STK24-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
STK24-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for STK24-AS1 Gene

Disorders for STK24-AS1 Gene

Additional Disease Information for STK24-AS1

No disorders were found for STK24-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for STK24-AS1 Gene

Publications for STK24-AS1 Gene

  1. An evaluation of the assembly of an approximately 15-Mb region on human chromosome 13q32-q33 linked to bipolar disorder and schizophrenia. (PMID: 11991713) Christian SL … Gershon ES (Genomics 2002) 3 58

Products for STK24-AS1 Gene

Sources for STK24-AS1 Gene

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