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Aliases for STAU2-AS1 Gene

Subcategory (RNA class) for STAU2-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for STAU2-AS1 Gene

  • STAU2 Antisense RNA 1 2 3
  • STAU2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for STAU2-AS1 Gene

ORGUL Members for STAU2-AS1 Gene

Previous GeneCards Identifiers for STAU2-AS1 Gene

  • GC08P074334

Summaries for STAU2-AS1 Gene

GeneCards Summary for STAU2-AS1 Gene

STAU2-AS1 (STAU2 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for STAU2-AS1 Gene - the ORGUL cluster for this gene includes several descriptions:

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for STAU2-AS1 Gene

Genomics for STAU2-AS1 Gene

Genomic Location for STAU2-AS1 Gene

Start:
73,420,004 bp from pter
End:
73,441,526 bp from pter
Size:
21,523 bases
Orientation:
Plus strand

Genomic View for STAU2-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for STAU2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for STAU2-AS1 Gene

No data available for Regulatory Elements for STAU2-AS1 Gene

Proteins for STAU2-AS1 Gene

Post-translational modifications for STAU2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for STAU2-AS1 Gene

Domains for STAU2-AS1 Gene

Gene Families for STAU2-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with STAU2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for STAU2-AS1 Gene

Function for STAU2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for STAU2-AS1 Gene

Localization for STAU2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for STAU2-AS1 Gene

Pathways for STAU2-AS1 Gene

SuperPathways for STAU2-AS1 Gene

No Data Available

Interacting Proteins for STAU2-AS1 Gene

Gene Ontology (GO) - Biological Process for STAU2-AS1 Gene

None

No data available for Pathways by source for STAU2-AS1 Gene

Transcripts for STAU2-AS1 Gene

mRNA/cDNA for STAU2-AS1 Gene

(2) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for STAU2-AS1 Gene

STAU2 antisense RNA 1:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate STAU2-AS1
    • Block miRNA regulation of STAU2-AS1 using miScript Target Protectors

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for STAU2-AS1 Gene

    No ASD Table

    Relevant External Links for STAU2-AS1 Gene

    GeneLoc Exon Structure for
    STAU2-AS1
    ECgene alternative splicing isoforms for
    STAU2-AS1

    Expression for STAU2-AS1 Gene

    mRNA expression in normal human tissues for STAU2-AS1 Gene

    mRNA differential expression in normal tissues according to GTEx for STAU2-AS1 Gene

    This gene is overexpressed in Minor Salivary Gland (6.4).

    SOURCE GeneReport for Unigene cluster for STAU2-AS1 Gene Hs.679921

    genes like me logo Genes that share expressions with STAU2-AS1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for STAU2-AS1 Gene

    Orthologs for STAU2-AS1 Gene

    Evolution for STAU2-AS1 Gene

    ENSEMBL:
    Gene Tree for STAU2-AS1 (if available)
    TreeFam:
    Gene Tree for STAU2-AS1 (if available)

    No data available for Orthologs for STAU2-AS1 Gene

    Paralogs for STAU2-AS1 Gene

    No data available for Paralogs for STAU2-AS1 Gene

    Variants for STAU2-AS1 Gene

    Sequence variations from dbSNP and Humsavar for STAU2-AS1 Gene

    SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
    rs7837372 -- 73,418,119(+) GGGAT(C/T)AGAAT upstream-variant-2KB
    rs16938647 -- 73,419,734(+) GGTGG(C/T)GAAGG upstream-variant-2KB
    rs17289787 -- 73,419,462(+) CATGG(A/G)TATAT upstream-variant-2KB
    rs111890737 -- 73,418,531(+) AACTG(C/T)TAGAT upstream-variant-2KB
    rs115019992 -- 73,418,242(+) TCTTG(A/G)TTTAA upstream-variant-2KB

    Relevant External Links for STAU2-AS1 Gene

    HapMap Linkage Disequilibrium report
    STAU2-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for STAU2-AS1 Gene

    Disorders for STAU2-AS1 Gene

    No disorders were found for STAU2-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for STAU2-AS1 Gene

    Publications for STAU2-AS1 Gene

    1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

    Products for STAU2-AS1 Gene

    Sources for STAU2-AS1 Gene

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