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Aliases for STARD7-AS1 Gene

Subcategory (RNA class) for STARD7-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for STARD7-AS1 Gene

  • STARD7 Antisense RNA 1 2 3 5

External Ids for STARD7-AS1 Gene

Previous GeneCards Identifiers for STARD7-AS1 Gene

  • GC02P096877

Summaries for STARD7-AS1 Gene

GeneCards Summary for STARD7-AS1 Gene

STARD7-AS1 (STARD7 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for STARD7-AS1 Gene

Genomics for STARD7-AS1 Gene

Regulatory Elements for STARD7-AS1 Gene

Enhancers for STARD7-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G096255 2.5 VISTA FANTOM5 Ensembl ENCODE dbSUPER 13 +50.9 50858 7.2 MLX DMAP1 YY1 ZNF143 SP3 NFYC PPARGC1A MEF2D SSRP1 RCOR2 DUSP2 CIAO1 STARD7 STARD7-AS1 ASTL ITPRIPL1 LOC105373495 SNRNP200 TMEM127 ARID5A
GH02G096161 1.8 FANTOM5 Ensembl ENCODE dbSUPER 11.6 -45.0 -44976 4.1 HDGF TBP PKNOX1 TBL1XR1 WRNIP1 EGR1 ELK1 SCRT2 ZNF143 FOS ASTL ADRA2B ITPRIPL1 STARD7-AS1 STARD7 LOC105373495 KCNIP3 DUSP2 ARID5A KANSL3
GH02G096249 1.6 Ensembl ENCODE dbSUPER 13 +43.6 43644 5.7 HDGF FOXA2 PKNOX1 CREB3L1 ARNT ARID4B SIN3A SLC30A9 ZNF766 FOS ITPRIPL1 STARD7 STARD7-AS1 ASTL DUSP2 LOC105373495 CIAO1 GPAT2P1 GC02M096251 PIR47017
GH02G096202 1.3 ENCODE dbSUPER 13.5 -4.8 -4765 1.6 HDGF MLX AGO1 ARID4B SIN3A DMAP1 YY1 ZNF143 ZNF263 SP3 CIAO1 STARD7-AS1 LMAN2L KCNIP3 GC02P096183
GH02G096186 1.1 ENCODE dbSUPER 12.6 -21.0 -20962 1.4 FOXA2 MLX ARID4B RAD21 ZSCAN9 RARA ZNF121 MIXL1 MIER2 PPARG STARD7 STARD7-AS1 DUSP2 ASTL ADRA2B GC02P096183
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around STARD7-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for STARD7-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000120243 -116 2601 HDGF HNRNPUL1 FOXA2 PKNOX1 MLX CREB3L1 AGO1 ZFP64 WRNIP1 ARID4B

Genomic Location for STARD7-AS1 Gene

Chromosome:
2
Start:
96,208,416 bp from pter
End:
96,242,623 bp from pter
Size:
34,208 bases
Orientation:
Plus strand

Genomic View for STARD7-AS1 Gene

Genes around STARD7-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
STARD7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for STARD7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for STARD7-AS1 Gene

Proteins for STARD7-AS1 Gene

Post-translational modifications for STARD7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for STARD7-AS1 Gene

Domains & Families for STARD7-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for STARD7-AS1 Gene

Function for STARD7-AS1 Gene

Phenotypes for STARD7-AS1 Gene

GenomeRNAi human phenotypes for STARD7-AS1:
genes like me logo Genes that share phenotypes with STARD7-AS1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for STARD7-AS1 Gene

Localization for STARD7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for STARD7-AS1 Gene

Pathways & Interactions for STARD7-AS1 Gene

SuperPathways for STARD7-AS1 Gene

No Data Available

Interacting Proteins for STARD7-AS1 Gene

Gene Ontology (GO) - Biological Process for STARD7-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for STARD7-AS1 Gene

Drugs & Compounds for STARD7-AS1 Gene

No Compound Related Data Available

Transcripts for STARD7-AS1 Gene

mRNA/cDNA for STARD7-AS1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for STARD7-AS1 Gene

No ASD Table

Relevant External Links for STARD7-AS1 Gene

GeneLoc Exon Structure for
STARD7-AS1
ECgene alternative splicing isoforms for
STARD7-AS1

Expression for STARD7-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for STARD7-AS1 Gene

genes like me logo Genes that share expression patterns with STARD7-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for STARD7-AS1 Gene

Orthologs for STARD7-AS1 Gene

Evolution for STARD7-AS1 Gene

ENSEMBL:
Gene Tree for STARD7-AS1 (if available)
TreeFam:
Gene Tree for STARD7-AS1 (if available)

No data available for Orthologs for STARD7-AS1 Gene

Paralogs for STARD7-AS1 Gene

No data available for Paralogs for STARD7-AS1 Gene

Variants for STARD7-AS1 Gene

Sequence variations from dbSNP and Humsavar for STARD7-AS1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000011715 -- 96,226,164(+) CTGCA(A/G)CCTCC intron-variant
rs1000040108 -- 96,219,414(+) AGCCA(C/T)TTCTG intron-variant
rs1000179463 -- 96,209,214(+) GGGGG(C/T)TGGGG intron-variant, upstream-variant-2KB
rs1000300332 -- 96,239,286(+) CCATT(A/G)GTTTG intron-variant
rs1000382452 -- 96,225,935(+) GCTCT(G/T)TTGCC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for STARD7-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv607e201 CNV deletion 23290073
esv3425717 CNV duplication 20981092
esv3591652 OTHER inversion 21293372
esv5003 OTHER complex 18987735
nsv1135873 CNV deletion 24896259
nsv834305 CNV gain 17160897
nsv963665 CNV duplication 23825009

Relevant External Links for STARD7-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
STARD7-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for STARD7-AS1 Gene

Disorders for STARD7-AS1 Gene

Relevant External Links for STARD7-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
STARD7-AS1

No disorders were found for STARD7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for STARD7-AS1 Gene

Publications for STARD7-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for STARD7-AS1 Gene

Sources for STARD7-AS1 Gene

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