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Aliases for STAM-AS1 Gene

Subcategory (RNA class) for STAM-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for STAM-AS1 Gene

  • STAM Antisense RNA 1 (Head To Head) 2 3
  • Locus 3182 2 3
  • Locus3182 3

External Ids for STAM-AS1 Gene

ORGUL Members for STAM-AS1 Gene

Previous GeneCards Identifiers for STAM-AS1 Gene

  • GC10U901933

Summaries for STAM-AS1 Gene

GeneCards Summary for STAM-AS1 Gene

STAM-AS1 (STAM Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for STAM-AS1 Gene

Genomics for STAM-AS1 Gene

Genomic Location for STAM-AS1 Gene

Start:
17,641,284 bp from pter
End:
17,643,878 bp from pter
Size:
2,595 bases
Orientation:
Minus strand

Genomic View for STAM-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for STAM-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for STAM-AS1 Gene

No data available for Regulatory Elements for STAM-AS1 Gene

Proteins for STAM-AS1 Gene

Post-translational modifications for STAM-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for STAM-AS1 Gene

Domains for STAM-AS1 Gene

Gene Families for STAM-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with STAM-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for STAM-AS1 Gene

Function for STAM-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for STAM-AS1 Gene

Localization for STAM-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for STAM-AS1 Gene

Pathways for STAM-AS1 Gene

SuperPathways for STAM-AS1 Gene

No Data Available

Interacting Proteins for STAM-AS1 Gene

Gene Ontology (GO) - Biological Process for STAM-AS1 Gene

None

No data available for Pathways by source for STAM-AS1 Gene

Transcripts for STAM-AS1 Gene

mRNA/cDNA for STAM-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for STAM-AS1 Gene

No ASD Table

Relevant External Links for STAM-AS1 Gene

GeneLoc Exon Structure for
STAM-AS1
ECgene alternative splicing isoforms for
STAM-AS1

Expression for STAM-AS1 Gene

mRNA expression in normal human tissues for STAM-AS1 Gene

genes like me logo Genes that share expressions with STAM-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for STAM-AS1 Gene

Orthologs for STAM-AS1 Gene

Evolution for STAM-AS1 Gene

ENSEMBL:
Gene Tree for STAM-AS1 (if available)
TreeFam:
Gene Tree for STAM-AS1 (if available)

No data available for Orthologs for STAM-AS1 Gene

Paralogs for STAM-AS1 Gene

No data available for Paralogs for STAM-AS1 Gene

Variants for STAM-AS1 Gene

Sequence variations from dbSNP and Humsavar for STAM-AS1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs7068027 -- 17,641,662(+) AGAAT(A/G)CACGG nc-transcript-variant
rs11254698 -- 17,641,696(+) TATTA(C/T)TCCCA nc-transcript-variant
rs12416367 -- 17,640,942(+) GTAGT(A/G)ACTCT downstream-variant-500B
rs17141443 -- 17,640,925(+) ATTAT(A/G)GACTT downstream-variant-500B
rs17141450 -- 17,641,975(+) CTTCC(G/T)TATCA nc-transcript-variant

Relevant External Links for STAM-AS1 Gene

HapMap Linkage Disequilibrium report
STAM-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for STAM-AS1 Gene

Disorders for STAM-AS1 Gene

No disorders were found for STAM-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for STAM-AS1 Gene

Publications for STAM-AS1 Gene

  1. Divergent transcription of long noncoding RNA/mRNA gene pairs in embryonic stem cells. (PMID: 23382218) Sigova A.A. … Young R.A. (Proc. Natl. Acad. Sci. U.S.A. 2013) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for STAM-AS1 Gene

Sources for STAM-AS1 Gene

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