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Aliases for ST7-OT3 Gene

Subcategory (RNA class) for ST7-OT3 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for ST7-OT3 Gene

  • ST7 Overlapping Transcript 3 2 3
  • ST7 Overlapping Transcript 3 (Non-Protein Coding) 2 3
  • ST7 Overlapping Transcript 3 (Non-Coding RNA) 3
  • Suppression Of Tumorigenicity 7 3
  • Non-Protein Coding RNA 26 2
  • NCRNA00026 3
  • ST7OT3 3
  • ST7 3

External Ids for ST7-OT3 Gene

Previous HGNC Symbols for ST7-OT3 Gene

  • ST7OT3

Previous GeneCards Identifiers for ST7-OT3 Gene

  • GC07P116823

Summaries for ST7-OT3 Gene

GeneCards Summary for ST7-OT3 Gene

ST7-OT3 (ST7 Overlapping Transcript 3) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ST7-OT3 Gene

Genomics for ST7-OT3 Gene

Genomic Location for ST7-OT3 Gene

Start:
117,182,681 bp from pter
End:
117,209,937 bp from pter
Size:
27,257 bases
Orientation:
Plus strand

Genomic View for ST7-OT3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ST7-OT3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ST7-OT3 Gene

No data available for Regulatory Elements for ST7-OT3 Gene

Proteins for ST7-OT3 Gene

Post-translational modifications for ST7-OT3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ST7-OT3 Gene

Domains for ST7-OT3 Gene

Gene Families for ST7-OT3 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ST7-OT3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ST7-OT3 Gene

Function for ST7-OT3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ST7-OT3 Gene

Localization for ST7-OT3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ST7-OT3 Gene

Pathways for ST7-OT3 Gene

SuperPathways for ST7-OT3 Gene

No Data Available

Interacting Proteins for ST7-OT3 Gene

Gene Ontology (GO) - Biological Process for ST7-OT3 Gene

None

No data available for Pathways by source for ST7-OT3 Gene

Transcripts for ST7-OT3 Gene

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ST7-OT3

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ST7-OT3 Gene

No ASD Table

Relevant External Links for ST7-OT3 Gene

GeneLoc Exon Structure for
ST7-OT3
ECgene alternative splicing isoforms for
ST7-OT3

No data available for mRNA/cDNA for ST7-OT3 Gene

Expression for ST7-OT3 Gene

mRNA expression in normal human tissues for ST7-OT3 Gene

genes like me logo Genes that share expressions with ST7-OT3: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for ST7-OT3 Gene

Orthologs for ST7-OT3 Gene

No data available for Orthologs and Evolution for ST7-OT3 Gene

Paralogs for ST7-OT3 Gene

No data available for Paralogs for ST7-OT3 Gene

Variants for ST7-OT3 Gene

Structural Variations from Database of Genomic Variants (DGV) for ST7-OT3 Gene

Variant ID Type Subtype PubMed ID
nsv7405 OTHER Inversion 18451855
nsv831108 CNV Gain 17160897
nsv5916 CNV Loss 18451855
esv2628908 CNV Deletion 19546169
esv2232715 CNV Deletion 18987734
esv4717 CNV Deletion 18987735
esv2623394 CNV Deletion 19546169
esv8605 CNV Loss 19470904
nsv366395 CNV Loss 16902084
esv2735063 CNV Deletion 23290073

Relevant External Links for ST7-OT3 Gene

HapMap Linkage Disequilibrium report
ST7-OT3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for ST7-OT3 Gene

Disorders for ST7-OT3 Gene

No disorders were found for ST7-OT3 Gene.

No data available for UniProtKB/Swiss-Prot for ST7-OT3 Gene

Publications for ST7-OT3 Gene

  1. The RAY1/ST7 tumor-suppressor locus on chromosome 7q31 represents a complex multi-transcript system. (PMID: 12213198) Vincent J.B. … Scherer S.W. (Genomics 2002) 2 3 23
  2. Chromosome 7q: where autism meets language disorder? (PMID: 10889044) Folstein S.E. … Mankoski R.E. (Am. J. Hum. Genet. 2000) 3
  3. Identification of a novel gene on chromosome 7q31 that is interrupted by a translocation breakpoint in an autistic individual. (PMID: 10889047) Vincent J.B. … Scherer S.W. (Am. J. Hum. Genet. 2000) 3
  4. Recognition of unknown conserved alternatively spliced exons. (PMID: 16110330) Ohler U. … Burge C.B. (PLoS Comput. Biol. 2005) 3

Products for ST7-OT3 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ST7-OT3
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ST7-OT3
    • Block miRNA regulation of ST7-OT3 using miScript Target Protectors

    Sources for ST7-OT3 Gene

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