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Aliases for ST7-AS2 Gene

Subcategory (RNA class) for ST7-AS2 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for ST7-AS2 Gene

  • ST7 Antisense RNA 2 2 3
  • ST7 Overlapping Transcript 2 (Antisense Non-Coding RNA) 2 3
  • ST7 Overlapping Transcript 2 (Non-Protein Coding) 2 3
  • ST7 Antisense RNA 2 (Non-Protein Coding) 2 3
  • ST7 Overlapping Transcript Antisense 2 2
  • ST7AS2 3
  • ST7OT2 3

External Ids for ST7-AS2 Gene

ORGUL Members for ST7-AS2 Gene

Previous HGNC Symbols for ST7-AS2 Gene

  • ST7OT2

Previous GeneCards Identifiers for ST7-AS2 Gene

  • GC07M116714

Summaries for ST7-AS2 Gene

GeneCards Summary for ST7-AS2 Gene

ST7-AS2 (ST7 Antisense RNA 2) is an RNA Gene, and is affiliated with the antisense RNA class.

fRNAdb sequence ontologies for ST7-AS2 Gene - the ORGUL cluster for this gene includes several descriptions:

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ST7-AS2 Gene

Genomics for ST7-AS2 Gene

Genomic Location for ST7-AS2 Gene

Start:
117,072,072 bp from pter
End:
117,146,480 bp from pter
Size:
74,409 bases
Orientation:
Minus strand

Genomic View for ST7-AS2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ST7-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ST7-AS2 Gene

No data available for Regulatory Elements for ST7-AS2 Gene

Proteins for ST7-AS2 Gene

Post-translational modifications for ST7-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ST7-AS2 Gene

Domains for ST7-AS2 Gene

Gene Families for ST7-AS2 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ST7-AS2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ST7-AS2 Gene

Function for ST7-AS2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ST7-AS2 Gene

Localization for ST7-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ST7-AS2 Gene

Pathways for ST7-AS2 Gene

SuperPathways for ST7-AS2 Gene

No Data Available

Interacting Proteins for ST7-AS2 Gene

Gene Ontology (GO) - Biological Process for ST7-AS2 Gene

None

No data available for Pathways by source for ST7-AS2 Gene

Transcripts for ST7-AS2 Gene

mRNA/cDNA for ST7-AS2 Gene

(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ST7-AS2 Gene

No ASD Table

Relevant External Links for ST7-AS2 Gene

GeneLoc Exon Structure for
ST7-AS2
ECgene alternative splicing isoforms for
ST7-AS2

Expression for ST7-AS2 Gene

mRNA expression in normal human tissues for ST7-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for ST7-AS2 Gene

This gene is overexpressed in Testis (23.8).

SOURCE GeneReport for Unigene cluster for ST7-AS2 Gene Hs.628891

genes like me logo Genes that share expressions with ST7-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for ST7-AS2 Gene

Orthologs for ST7-AS2 Gene

Evolution for ST7-AS2 Gene

ENSEMBL:
Gene Tree for ST7-AS2 (if available)
TreeFam:
Gene Tree for ST7-AS2 (if available)

No data available for Orthologs for ST7-AS2 Gene

Paralogs for ST7-AS2 Gene

No data available for Paralogs for ST7-AS2 Gene

Variants for ST7-AS2 Gene

Structural Variations from Database of Genomic Variants (DGV) for ST7-AS2 Gene

Variant ID Type Subtype PubMed ID
nsv7405 OTHER Inversion 18451855
nsv831108 CNV Gain 17160897
esv271633 CNV Insertion 20981092

Relevant External Links for ST7-AS2 Gene

HapMap Linkage Disequilibrium report
ST7-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for ST7-AS2 Gene

Disorders for ST7-AS2 Gene

No disorders were found for ST7-AS2 Gene.

No data available for UniProtKB/Swiss-Prot for ST7-AS2 Gene

Publications for ST7-AS2 Gene

  1. The RAY1/ST7 tumor-suppressor locus on chromosome 7q31 represents a complex multi-transcript system. (PMID: 12213198) Vincent J.B. … Scherer S.W. (Genomics 2002) 2 3
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for ST7-AS2 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ST7-AS2
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ST7-AS2
    • Block miRNA regulation of ST7-AS2 using miScript Target Protectors

    Sources for ST7-AS2 Gene

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