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Aliases for ST7-AS1 Gene

Subcategory (RNA class) for ST7-AS1 Gene

lncRNA

Quality Score for this RNA gene is

5

Aliases for ST7-AS1 Gene

  • ST7 Antisense RNA 1 2 3 5
  • ST7 Overlapping Transcript 1 (Antisense Non-Coding RNA) 2 3
  • ST7 Overlapping Transcript 1 (Non-Protein Coding) 2 3
  • ST7 Antisense RNA 1 (Non-Protein Coding) 2 3
  • ST7 Overlapping Transcript Antisense 1 2 3
  • ST7AS1 3
  • ST7OT1 3

External Ids for ST7-AS1 Gene

ORGUL Members for ST7-AS1 Gene

Previous HGNC Symbols for ST7-AS1 Gene

  • ST7OT1

Previous GeneCards Identifiers for ST7-AS1 Gene

  • GC07M116593

Summaries for ST7-AS1 Gene

GeneCards Summary for ST7-AS1 Gene

ST7-AS1 (ST7 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for ST7-AS1 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ST7-AS1 Gene

Genomics for ST7-AS1 Gene

Regulatory Elements for ST7-AS1 Gene

Enhancers for ST7-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around ST7-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for ST7-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around ST7-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ST7-AS1 Gene

Chromosome:
7
Start:
116,952,446 bp from pter
End:
116,954,334 bp from pter
Size:
1,889 bases
Orientation:
Minus strand

Genomic View for ST7-AS1 Gene

Genes around ST7-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ST7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ST7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ST7-AS1 Gene

ORGUL Member Location for ST7-AS1 Gene

ORGUL Member Location for ST7-AS1 gene

Proteins for ST7-AS1 Gene

Post-translational modifications for ST7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ST7-AS1 Gene

Domains & Families for ST7-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ST7-AS1 Gene

Function for ST7-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ST7-AS1 Gene

Localization for ST7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ST7-AS1 Gene

Pathways & Interactions for ST7-AS1 Gene

SuperPathways for ST7-AS1 Gene

No Data Available

Interacting Proteins for ST7-AS1 Gene

Gene Ontology (GO) - Biological Process for ST7-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ST7-AS1 Gene

Drugs & Compounds for ST7-AS1 Gene

No Compound Related Data Available

Transcripts for ST7-AS1 Gene

mRNA/cDNA for ST7-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ST7-AS1 Gene

ST7 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ST7-AS1 Gene

No ASD Table

Relevant External Links for ST7-AS1 Gene

GeneLoc Exon Structure for
ST7-AS1
ECgene alternative splicing isoforms for
ST7-AS1

Expression for ST7-AS1 Gene

mRNA expression in normal human tissues for ST7-AS1 Gene

SOURCE GeneReport for Unigene cluster for ST7-AS1 Gene Hs.597516

genes like me logo Genes that share expression patterns with ST7-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for ST7-AS1 Gene

Orthologs for ST7-AS1 Gene

Evolution for ST7-AS1 Gene

ENSEMBL:
Gene Tree for ST7-AS1 (if available)
TreeFam:
Gene Tree for ST7-AS1 (if available)

No data available for Orthologs for ST7-AS1 Gene

Paralogs for ST7-AS1 Gene

No data available for Paralogs for ST7-AS1 Gene

Variants for ST7-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for ST7-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv7405 OTHER Inversion 18451855
nsv831107 CNV Gain 17160897
dgv7465n71 CNV Gain 21882294
esv2659068 CNV Deletion 23128226

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Variation tolerance and Relevant External Links for ST7-AS1 Gene

Disorders for ST7-AS1 Gene

Relevant External Links for ST7-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ST7-AS1

No disorders were found for ST7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ST7-AS1 Gene

Publications for ST7-AS1 Gene

  1. The RAY1/ST7 tumor-suppressor locus on chromosome 7q31 represents a complex multi-transcript system. (PMID: 12213198) Vincent J.B. … Scherer S.W. (Genomics 2002) 2 3 67
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for ST7-AS1 Gene

Sources for ST7-AS1 Gene

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