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Aliases for ST6GAL2-IT1 Gene

Subcategory (RNA class) for ST6GAL2-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ST6GAL2-IT1 Gene

  • ST6GAL2 Intronic Transcript 1 2 3 5
  • ST6GAL2 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for ST6GAL2-IT1 Gene

Previous GeneCards Identifiers for ST6GAL2-IT1 Gene

  • GC00U933986
  • GC02M107440

Summaries for ST6GAL2-IT1 Gene

GeneCards Summary for ST6GAL2-IT1 Gene

ST6GAL2-IT1 (ST6GAL2 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ST6GAL2-IT1 Gene

Genomics for ST6GAL2-IT1 Gene

Regulatory Elements for ST6GAL2-IT1 Gene

Enhancers for ST6GAL2-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G106816 0.4 dbSUPER 5 +7.3 7336 2.2 ATF2 EP300 ST6GAL2-IT1 PIR57989
GH02G106808 0.5 dbSUPER 0.4 +16.1 16097 1.6 FOXA2 SMARCA4 ATF2 ST6GAL2 PIR57989 ST6GAL2-IT1
GH02G106831 0.4 dbSUPER 0.4 -6.3 -6295 0.5 ZNF507 ENSG00000227294 ST6GAL2-IT1
GH02G106811 0.4 dbSUPER 0.4 +13.1 13147 1.4 RAD21 NR2F2 ENSG00000227294 ST6GAL2 PIR57989 ST6GAL2-IT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ST6GAL2-IT1 on UCSC Golden Path with GeneCards custom track

Promoters for ST6GAL2-IT1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000121305 365 1401 CTCF MXI1 SUZ12 TEAD4 SIN3A RBBP5 CHD7 ZNF2 RAD21 ZFHX2

Genomic Location for ST6GAL2-IT1 Gene

Chromosome:
2
Start:
106,822,923 bp from pter
End:
106,825,031 bp from pter
Size:
2,109 bases
Orientation:
Minus strand

Genomic View for ST6GAL2-IT1 Gene

Genes around ST6GAL2-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ST6GAL2-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ST6GAL2-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ST6GAL2-IT1 Gene

Proteins for ST6GAL2-IT1 Gene

Post-translational modifications for ST6GAL2-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ST6GAL2-IT1 Gene

Domains & Families for ST6GAL2-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ST6GAL2-IT1 Gene

Function for ST6GAL2-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ST6GAL2-IT1 Gene

Localization for ST6GAL2-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ST6GAL2-IT1 Gene

Pathways & Interactions for ST6GAL2-IT1 Gene

SuperPathways for ST6GAL2-IT1 Gene

No Data Available

Interacting Proteins for ST6GAL2-IT1 Gene

Gene Ontology (GO) - Biological Process for ST6GAL2-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ST6GAL2-IT1 Gene

Drugs & Compounds for ST6GAL2-IT1 Gene

No Compound Related Data Available

Transcripts for ST6GAL2-IT1 Gene

mRNA/cDNA for ST6GAL2-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ST6GAL2-IT1 Gene

No ASD Table

Relevant External Links for ST6GAL2-IT1 Gene

GeneLoc Exon Structure for
ST6GAL2-IT1
ECgene alternative splicing isoforms for
ST6GAL2-IT1

Expression for ST6GAL2-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ST6GAL2-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for ST6GAL2-IT1 Gene

This gene is overexpressed in Artery - Aorta (x11.9), Thyroid (x6.7), Artery - Coronary (x5.6), and Testis (x5.0).
genes like me logo Genes that share expression patterns with ST6GAL2-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ST6GAL2-IT1 Gene

Orthologs for ST6GAL2-IT1 Gene

Evolution for ST6GAL2-IT1 Gene

ENSEMBL:
Gene Tree for ST6GAL2-IT1 (if available)
TreeFam:
Gene Tree for ST6GAL2-IT1 (if available)

No data available for Orthologs for ST6GAL2-IT1 Gene

Paralogs for ST6GAL2-IT1 Gene

No data available for Paralogs for ST6GAL2-IT1 Gene

Variants for ST6GAL2-IT1 Gene

Relevant External Links for ST6GAL2-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ST6GAL2-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ST6GAL2-IT1 Gene

Disorders for ST6GAL2-IT1 Gene

No disorders were found for ST6GAL2-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ST6GAL2-IT1 Gene

Publications for ST6GAL2-IT1 Gene

No publications were found for ST6GAL2-IT1 Gene.

Products for ST6GAL2-IT1 Gene

Sources for ST6GAL2-IT1 Gene

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