Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ST3GAL4-AS1 Gene

Subcategory (RNA class) for ST3GAL4-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ST3GAL4-AS1 Gene

  • ST3GAL4 Antisense RNA 1 (Head To Head) 2 3 5
  • DCPS-AS1 3

External Ids for ST3GAL4-AS1 Gene

Previous GeneCards Identifiers for ST3GAL4-AS1 Gene

  • GC11M126211

Summaries for ST3GAL4-AS1 Gene

GeneCards Summary for ST3GAL4-AS1 Gene

ST3GAL4-AS1 (ST3GAL4 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ST3GAL4-AS1 Gene

Genomics for ST3GAL4-AS1 Gene

Regulatory Elements for ST3GAL4-AS1 Gene


Promoters for ST3GAL4-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around ST3GAL4-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ST3GAL4-AS1 Gene

Chromosome:
11
Start:
126,340,889 bp from pter
End:
126,355,587 bp from pter
Size:
14,699 bases
Orientation:
Minus strand

Genomic View for ST3GAL4-AS1 Gene

Genes around ST3GAL4-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ST3GAL4-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ST3GAL4-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ST3GAL4-AS1 Gene

Proteins for ST3GAL4-AS1 Gene

Post-translational modifications for ST3GAL4-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ST3GAL4-AS1 Gene

Domains & Families for ST3GAL4-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ST3GAL4-AS1 Gene

Function for ST3GAL4-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ST3GAL4-AS1 Gene

Localization for ST3GAL4-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ST3GAL4-AS1 Gene

Pathways & Interactions for ST3GAL4-AS1 Gene

SuperPathways for ST3GAL4-AS1 Gene

No Data Available

Interacting Proteins for ST3GAL4-AS1 Gene

Gene Ontology (GO) - Biological Process for ST3GAL4-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ST3GAL4-AS1 Gene

Drugs & Compounds for ST3GAL4-AS1 Gene

No Compound Related Data Available

Transcripts for ST3GAL4-AS1 Gene

mRNA/cDNA for ST3GAL4-AS1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for ST3GAL4-AS1 Gene

No ASD Table

Relevant External Links for ST3GAL4-AS1 Gene

GeneLoc Exon Structure for
ST3GAL4-AS1
ECgene alternative splicing isoforms for
ST3GAL4-AS1

Expression for ST3GAL4-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ST3GAL4-AS1 Gene

Orthologs for ST3GAL4-AS1 Gene

Evolution for ST3GAL4-AS1 Gene

ENSEMBL:
Gene Tree for ST3GAL4-AS1 (if available)
TreeFam:
Gene Tree for ST3GAL4-AS1 (if available)

No data available for Orthologs for ST3GAL4-AS1 Gene

Paralogs for ST3GAL4-AS1 Gene

No data available for Paralogs for ST3GAL4-AS1 Gene

Variants for ST3GAL4-AS1 Gene

Sequence variations from dbSNP and Humsavar for ST3GAL4-AS1 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1973458 -- 126,347,472(+) ACCCA(C/T)CTCGG intron-variant
rs10581912 -- 126,352,845(+) AGAAA(A/G)AAAAA intron-variant
rs34422379 -- 126,350,525(+) GCTAA(-/T)TTTTG intron-variant
rs77235311 -- 126,352,643(+) CCCCA(C/T)GGGCC intron-variant
rs77246992 -- 126,349,955(+) TCAAG(C/T)GTTTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ST3GAL4-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv556530 CNV loss 21841781
nsv826123 CNV gain 20364138

Relevant External Links for ST3GAL4-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ST3GAL4-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ST3GAL4-AS1 Gene

Disorders for ST3GAL4-AS1 Gene

Relevant External Links for ST3GAL4-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ST3GAL4-AS1

No disorders were found for ST3GAL4-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ST3GAL4-AS1 Gene

Publications for ST3GAL4-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 65
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 65

Products for ST3GAL4-AS1 Gene

Sources for ST3GAL4-AS1 Gene

Content