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Aliases for ST13P5 Gene

Aliases for ST13P5 Gene

  • ST13, Hsp70 Interacting Protein Pseudogene 5 2 3
  • Suppression Of Tumorigenicity 13 (Colon Carcinoma) (Hsp70 Interacting Protein) Pseudogene 5 2 3 5
  • Family With Sequence Similarity 10, Member A5 Pseudogene 2 3
  • FAM10A5 3 4
  • Family With Sequence Similarity 10, Member A5 2
  • Suppression Of Tumorigenicity 13 Pseudogene 5 4

External Ids for ST13P5 Gene

Previous HGNC Symbols for ST13P5 Gene

  • FAM10A5

Previous GeneCards Identifiers for ST13P5 Gene

  • GC11P018283
  • GC11P017966

Summaries for ST13P5 Gene

GeneCards Summary for ST13P5 Gene

ST13P5 (ST13, Hsp70 Interacting Protein Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ST13P5 Gene

Genomics for ST13P5 Gene

Regulatory Elements for ST13P5 Gene

Enhancers for ST13P5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G018720 1.1 Ensembl ENCODE 4.8 +459.4 459429 2.3 WRNIP1 ZNF76 RAD21 GLIS2 ZNF143 ZNF263 SMARCA5 SP3 GATAD2B IKZF1 LOC100129966 SPTY2D1-AS1 ST13P5 LOC105376579 IGSF22
GH11G018259 0.8 ENCODE 0.7 -2.4 -2427 0.1 SOX13 MAX CEBPG ZNF644 RAD21 YY1 TEAD3 ARID3A HNF4G IKZF2 SAA4 LOC494141 LOC645319 SAAL1 HIGD1AP5 ENSG00000255470 GLTPP1 HPS5 ST13P5 GC11M018255
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ST13P5 on UCSC Golden Path with GeneCards custom track

Promoters for ST13P5 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000037596 116 399

Genomic Location for ST13P5 Gene

Chromosome:
11
Start:
18,261,885 bp from pter
End:
18,263,501 bp from pter
Size:
1,617 bases
Orientation:
Plus strand

Genomic View for ST13P5 Gene

Genes around ST13P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ST13P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ST13P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ST13P5 Gene

Proteins for ST13P5 Gene

  • Protein details for ST13P5 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NFI4-F10A5_HUMAN
    Recommended name:
    Putative protein FAM10A5
    Protein Accession:
    Q8NFI4

    Protein attributes for ST13P5 Gene

    Size:
    369 amino acids
    Molecular mass:
    41378 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ST13P5 Gene

Post-translational modifications for ST13P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ST13P5 Gene

Domains & Families for ST13P5 Gene

Suggested Antigen Peptide Sequences for ST13P5 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8NFI4

UniProtKB/Swiss-Prot:

F10A5_HUMAN :
  • Belongs to the FAM10 family.
Family:
  • Belongs to the FAM10 family.
genes like me logo Genes that share domains with ST13P5: view

No data available for Gene Families for ST13P5 Gene

Function for ST13P5 Gene

Gene Ontology (GO) - Molecular Function for ST13P5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0046983 protein dimerization activity IEA --
genes like me logo Genes that share ontologies with ST13P5: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ST13P5 Gene

Localization for ST13P5 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ST13P5 Gene

Cytoplasm.

Gene Ontology (GO) - Cellular Components for ST13P5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
genes like me logo Genes that share ontologies with ST13P5: view

No data available for Subcellular locations from COMPARTMENTS for ST13P5 Gene

Pathways & Interactions for ST13P5 Gene

SuperPathways for ST13P5 Gene

No Data Available

Interacting Proteins for ST13P5 Gene

Gene Ontology (GO) - Biological Process for ST13P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ST13P5 Gene

Drugs & Compounds for ST13P5 Gene

No Compound Related Data Available

Transcripts for ST13P5 Gene

mRNA/cDNA for ST13P5 Gene

(1) Additional mRNA sequences :
(6) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ST13P5 Gene

Suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 5:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ST13P5 Gene

No ASD Table

Relevant External Links for ST13P5 Gene

GeneLoc Exon Structure for
ST13P5
ECgene alternative splicing isoforms for
ST13P5

Expression for ST13P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ST13P5 Gene

Protein differential expression in normal tissues from HIPED for ST13P5 Gene

This gene is overexpressed in Heart (27.8), Skin (19.8), Lung (14.9), and Brain (6.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ST13P5 Gene



Protein tissue co-expression partners for ST13P5 Gene

NURSA nuclear receptor signaling pathways regulating expression of ST13P5 Gene:

ST13P5

SOURCE GeneReport for Unigene cluster for ST13P5 Gene:

Hs.567697
genes like me logo Genes that share expression patterns with ST13P5: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ST13P5 Gene

Orthologs for ST13P5 Gene

Evolution for ST13P5 Gene

ENSEMBL:
Gene Tree for ST13P5 (if available)
TreeFam:
Gene Tree for ST13P5 (if available)

No data available for Orthologs for ST13P5 Gene

Paralogs for ST13P5 Gene

(2) SIMAP similar genes for ST13P5 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ST13P5: view

No data available for Paralogs for ST13P5 Gene

Variants for ST13P5 Gene

Relevant External Links for ST13P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ST13P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ST13P5 Gene

Disorders for ST13P5 Gene

Relevant External Links for ST13P5

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ST13P5

No disorders were found for ST13P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ST13P5 Gene

Publications for ST13P5 Gene

  1. Characterization of FAM10A4, a member of the ST13 tumor suppressor gene family that maps to the 13q14.3 region associated with B-Cell leukemia, multiple myeloma, and prostate cancer. (PMID: 12079276) Sossey-Alaoui K. … Cowell J.K. (Genomics 2002) 2 3 4 64
  2. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 4 64

Products for ST13P5 Gene

Sources for ST13P5 Gene

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