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Aliases for SSXP9 Gene

Aliases for SSXP9 Gene

  • SSX Family Pseudogene 9 2 3 5
  • SSX9 Pseudogene 3
  • PsiSSX9 3

External Ids for SSXP9 Gene

Previous GeneCards Identifiers for SSXP9 Gene

  • GC0XP048067
  • GC0XP048182

Summaries for SSXP9 Gene

GeneCards Summary for SSXP9 Gene

SSXP9 (SSX Family Pseudogene 9) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SSXP9 Gene

Genomics for SSXP9 Gene

Regulatory Elements for SSXP9 Gene

Enhancers for SSXP9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF048589 1.2 Ensembl ENCODE 16.2 +269.0 269038 3.1 ELF3 ARNT CREB3L1 RAD21 ZNF2 ZNF366 SCRT2 FOS YY2 USF2 ENSG00000204620 ENSG00000270747 SSXP9 SSX9 GAGE12G GAGE2A GAGE12C GAGE12J GAGE12H ENSG00000270012
GH0XF049037 1.1 ENCODE 16.2 +718.9 718939 7.0 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF766 GAGE12J GAGE12C GAGE12G GAGE12H GAGE2A SSXP9 PAGE1 ENSG00000270747 SSX9 PRAF2
GH0XF049052 1.1 ENCODE 16.2 +731.8 731813 2.2 PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 FOS CEBPZ ENSG00000204620 GAGE12J GAGE12C GAGE12G GAGE12H GAGE2A PAGE1 ENSG00000270747 SSX9 SSXP9
GH0XF048910 1 ENCODE 16.2 +590.0 589980 4.0 PKNOX1 ATF1 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF121 ELK1 GAGE12J SSXP9 ENSG00000270747 GAGE12G GAGE2A SSX9 PAGE1 GAGE12C GAGE12H ENSG00000204620
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SSXP9 on UCSC Golden Path with GeneCards custom track

Genomic Location for SSXP9 Gene

Chromosome:
X
Start:
48,322,193 bp from pter
End:
48,328,372 bp from pter
Size:
6,180 bases
Orientation:
Plus strand

Genomic View for SSXP9 Gene

Genes around SSXP9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SSXP9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SSXP9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SSXP9 Gene

Proteins for SSXP9 Gene

Post-translational modifications for SSXP9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SSXP9 Gene

Domains & Families for SSXP9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SSXP9 Gene

Function for SSXP9 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SSXP9 Gene

Localization for SSXP9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SSXP9 Gene

Pathways & Interactions for SSXP9 Gene

SuperPathways for SSXP9 Gene

No Data Available

Interacting Proteins for SSXP9 Gene

Gene Ontology (GO) - Biological Process for SSXP9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SSXP9 Gene

Transcripts for SSXP9 Gene

mRNA/cDNA for SSXP9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SSXP9 Gene

No ASD Table

Relevant External Links for SSXP9 Gene

GeneLoc Exon Structure for
SSXP9
ECgene alternative splicing isoforms for
SSXP9

Expression for SSXP9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SSXP9 Gene

NURSA nuclear receptor signaling pathways regulating expression of SSXP9 Gene:

SSXP9
genes like me logo Genes that share expression patterns with SSXP9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SSXP9 Gene

Orthologs for SSXP9 Gene

Evolution for SSXP9 Gene

ENSEMBL:
Gene Tree for SSXP9 (if available)
TreeFam:
Gene Tree for SSXP9 (if available)

No data available for Orthologs for SSXP9 Gene

Paralogs for SSXP9 Gene

No data available for Paralogs for SSXP9 Gene

Variants for SSXP9 Gene

Relevant External Links for SSXP9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SSXP9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SSXP9 Gene

Disorders for SSXP9 Gene

No disorders were found for SSXP9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SSXP9 Gene

Publications for SSXP9 Gene

  1. The SSX gene family: characterization of 9 complete genes. (PMID: 12216073) Gure A.O. … Chen Y.-T. (Int. J. Cancer 2002) 2 3 64

Products for SSXP9 Gene

Sources for SSXP9 Gene

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