Free for academic non-profit institutions. Other users need a Commercial license

SSXP5 Gene(Pseudogene)

SSX Family Pseudogene 5

GCID:
GC0XP052672
GIFtS:
10
Genes Participants
UDN Logo

Aliases for SSXP5 Gene

Aliases for SSXP5 Gene

  • SSX Family Pseudogene 5 2 3 5
  • SSX5 Pseudogene 3
  • PsiSSX5 3

External Ids for SSXP5 Gene

Previous GeneCards Identifiers for SSXP5 Gene

  • GC0XP052669
  • GC0XP052719

Summaries for SSXP5 Gene

GeneCards Summary for SSXP5 Gene

SSXP5 (SSX Family Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SSXP5 Gene

Genomics for SSXP5 Gene

Products:

  1. Regulatory Element

Regulatory Elements for SSXP5 Gene

Enhancers for SSXP5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF052933 1.8 FANTOM5 Ensembl ENCODE 16.2 +262.5 262538 2.5 HDGF PKNOX1 WRNIP1 ARID4B SIN3A FEZF1 YY1 CBX5 ZNF143 ZNF207 SSXP5 SSX7 RPSAP62 XAGE1A XAGE1B SPANXN5 XAGE5 ACTG1P10 KDM5C KDM5C-IT1
GH0XF053223 1.1 ENCODE 16.2 +552.2 552213 2.9 PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ACTG1P10 ENSG00000227329 RPSAP62 SSXP5 SSX7 XAGE1A XAGE1B RPL7AP71 KDM5C FAM120C
GH0XF053420 1.1 ENCODE 16.2 +749.8 749809 2.8 HDGF PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF207 ZNF143 ACTG1P10 ENSG00000227329 ENSG00000233250 KDM5C KDM5C-IT1 GPR173 RPSAP62 SSXP5 RPL7AP71 XAGE1A
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SSXP5 on UCSC Golden Path with GeneCards custom track

Genomic Location for SSXP5 Gene

Chromosome:
X
Start:
52,672,522 bp from pter
End:
52,678,581 bp from pter
Size:
6,060 bases
Orientation:
Plus strand

Genomic View for SSXP5 Gene

Genes around SSXP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SSXP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SSXP5 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for SSXP5 Gene

Proteins for SSXP5 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for SSXP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SSXP5 Gene

Domains & Families for SSXP5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SSXP5 Gene

Function for SSXP5 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SSXP5 Gene

Localization for SSXP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SSXP5 Gene

Pathways & Interactions for SSXP5 Gene

SuperPathways for SSXP5 Gene

PathCards logo More details on SuperPathways for SSXP5
No Data Available

Interacting Proteins for SSXP5 Gene

Gene Ontology (GO) - Biological Process for SSXP5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SSXP5 Gene

Drugs & Compounds for SSXP5 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for SSXP5 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for SSXP5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SSXP5 Gene

No ASD Table

Relevant External Links for SSXP5 Gene

GeneLoc Exon Structure for
SSXP5
ECgene alternative splicing isoforms for
SSXP5

Expression for SSXP5 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SSXP5 Gene

mRNA expression in normal human tissues for SSXP5 Gene
mRNA expression by GTEx for SSXP5 Gene

NURSA nuclear receptor signaling pathways regulating expression of SSXP5 Gene:

SSXP5
genes like me logo Genes that share expression patterns with SSXP5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SSXP5 Gene

Orthologs for SSXP5 Gene

Evolution for SSXP5 Gene

ENSEMBL:
Gene Tree for SSXP5 (if available)
TreeFam:
Gene Tree for SSXP5 (if available)

No data available for Orthologs for SSXP5 Gene

Paralogs for SSXP5 Gene

No data available for Paralogs for SSXP5 Gene

Variants for SSXP5 Gene

Relevant External Links for SSXP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SSXP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SSXP5 Gene

Disorders for SSXP5 Gene

No disorders were found for SSXP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SSXP5 Gene

Publications for SSXP5 Gene

  1. The SSX gene family: characterization of 9 complete genes. (PMID: 12216073) Gure A.O. … Chen Y.-T. (Int. J. Cancer 2002) 2 3 64

Products for SSXP5 Gene

Sources for SSXP5 Gene

Content
Loading form....