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Aliases & Descriptions for SSTR2
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| | | Descriptions |
|---|
| somatostatin receptor 2 2 |
|
| | Search outside databases for aliases for SSTR2 genePrevious GC identifers: GC17P071046 GC17P074201 GC17P071625 GC17P071758 |
Summaries for SSTR2(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for SSTR2: Somatostatin acts at many sites to inhibit the release of many hormones and other secretory proteins. The biologic effects of somatostatin are probably mediated by a family of G protein-coupled receptors that are expressed in a tissue-specific manner. SSTR2 is a member of the superfamily of receptors having seven transmembrane segments and is expressed in highest levels in cerebrum and kidney. [provided by RefSeq] UniProtKB/Swiss-Prot: SSR2_HUMAN, P30874Function: Receptor for somatostatins-14 and -28. This receptor is coupled via pertussis toxin sensitive G proteins to inhibition of adenylyl cyclase. In addition it stimulates phosphotyrosine phosphatase and PLC via pertussis toxin insensitive as well as sensitive G proteins. In RIN-5F cells, this receptor inhibits calcium entry by suppressing voltage dependent calcium-channelsGene Wiki entry for SSTR2 (Somatostatin_receptor_2) |
Genomic Location for SSTR2
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the SSTR2 gene 
Entrez Gene cytogenetic band: 17q24 Ensembl cytogenetic band: 17q25.1 HGNC cytogenetic band: 17q24SSTR2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 17 GeneLoc Exon Structure GeneLoc location for GC17P068672:
(about GC identifiers)
Start:
|
68,672,755 bp from pter |
End:
|
68,679,689 bp from pter |
Size:
|
6,935 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000017.9 NT_010641.15
| Proteins for SSTR2
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: SSR2_HUMAN, P30874 (See
protein sequence)Recommended Name: Somatostatin receptor type 2 Size: 369 amino acids; 41333 Da
Subunit: The C-terminus interacts with SHANK1 PDZ domain
Subcellular location: Cell membrane; Multi-pass membrane protein
Secondary accessions: A8K3Y0 Q4VBP0 Q96GE0 Q96TF2 Q9BWH1Alternative splicing: 2 isoforms: P30874-1 P30874-2 Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_001041.1
ENSEMBL proteins: ENSP00000326616 ENSP00000350198
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
4 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for SSTR2: Assays for SSTR2: | Protein
Domains/ Families for SSTR2(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P30874
ProtoNet protein and cluster: P30874 2 Blocks protein families: IPB000586 Somatostatin receptor signature IPB002074 Somatostatin receptor type 2 signature
UniProtKB/Swiss-Prot: SSR2_HUMAN, P30874Similarity: Belongs to the G-protein coupled receptor 1 family | Gene Function for SSTR2
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001050
Applied Biosystems Silencer® siRNAs for SSTR2
Sigma-Aldrich siRNA and siRNA Panels for SSTR2  Sigma-Aldrich shRNA Panels and shRNA for SSTR2  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001050                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001050                                  untagged cDNA clone in CMV expression vector: NM_001050 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001050
UniProtKB/Swiss-Prot: SSR2_HUMAN, P30874Function: Receptor for somatostatins-14 and -28. This receptor is coupled via pertussis toxin sensitive G proteins to inhibition of adenylyl cyclase. In addition it stimulates phosphotyrosine phosphatase and PLC via pertussis toxin insensitive as well as sensitive G proteins. In RIN-5F cells, this receptor inhibits calcium entry by suppressing voltage dependent calcium-channelsGenatlas biochemistry entry for SSTR2:somatostatin receptor gene 2,G protein coupled receptor superfamily6 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Sstr2):
5 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for SSTR2
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
1 Sigma-Aldrich "Your Favorite Gene" Pathway for SSTR2 (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for SSTR2 
5/24 Interacting proteins for SSTR2 (ENSP000003501983 P308742) via UniProtKB, MINT, and/or STRING (see all 24
)About this table
5/8 Gene Ontology (GO) biological process terms (links to tree view) (see all 8
): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0007165 | signal transduction |
IEA | -- | | GO:0007187 | G-protein signaling, coupled to cyclic nucleotide second messenger |
TAS | 7914078 | | GO:0007193 | inhibition of adenylate cyclase activity by G-protein signaling |
IEA | -- | | GO:0007218 | neuropeptide signaling pathway |
IEA | -- | | GO:0007267 | cell-cell signaling |
TAS | 1346068 | About this table
|
Drugs & Compounds for SSTR2(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Compounds for SSTR2 available from Tocris Bioscience About this table
10/13 Novoseek chemical compound relationships for SSTR2 gene (see all 13
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| 111in-pentetreotide |
80.68 |
15 |
16470879 (4), 16625862 (1), 19245777 (1), 19307732 (1) (see all 6) |
| tyr-3-octreotide |
72.93 |
2 |
11585290 (1), 11965608 (1) |
| ribonucleic acid |
43.65 |
7 |
7775631 (1), 10487698 (1), 10486467 (1), 10902809 (1) (see all 5) |
| thymidine |
41.25 |
8 |
16954557 (1), 12011224 (1), 12353250 (1), 18509006 (1) (see all 8) |
| sodium iodide |
29.73 |
1 |
12353250 (1) |
| forskolin |
26.64 |
2 |
8386508 (1), 7914078 (1) |
| acth |
20.13 |
3 |
7763254 (1), 17984930 (1) |
| glyceraldehyde 3-phosphate |
19.07 |
4 |
10690891 (1), 11231991 (1), 16711510 (1) |
| phosphotyrosine |
13.48 |
3 |
19365586 (1), 11914546 (1) |
| tyrosine |
12.46 |
9 |
7907795 (3), 9419818 (1), 9212054 (1), 7674817 (1) (see all 6) |
About this table
|
Transcripts for SSTR2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001050
Sigma-Aldrich siRNA and siRNA Panels for SSTR2  Sigma-Aldrich shRNA Panels and shRNA for SSTR2  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001050 REFSEQ mRNAs for SSTR2 gene: NM_001050.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001050               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001050                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001050                                  untagged cDNA clone in CMV expression vector: NM_001050  Additional cDNA sequence: AK290745.1 AK313866.1 BC000256.1 BC009522.1 BC019610.1 BC095495.1 BT019926.1 CR593522.1 2 DOTS entries: DT.70101256 DT.120979121 24/66 AceView cDNA sequences (see all 66
):AI582640 AA599080 AW772094 AW405802 CB177996 BE326815 NM_001050 BC019610 BC000256 CF147826 BE252309 BQ416716 CR593522 BX090595 BG706556 BE782762 AK093950 BG329444 AW263315 AW452036 BM450923 BX419487 BC009522 AW772489
highest scoring ESTs for SSTR2:AA932464 AI582640 AL536711 AW148723 AW263315 AW405802 AW772094 AW772489 BC000256 BC009522 Unigene Cluster for SSTR2: Somatostatin receptor 2 Hs.514451 [show with all ESTs]Unigene Representative Sequence: NM_001050
GeneLoc Exon Structure
2 Alternative Splicing Database (ASD) splice patterns (SP) for SSTR2
| ExUns: | 1a | · | 1b | ^ | 2 | ^ | 3a | · | 3b | |
| SP1: | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | - |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for SSTR2
2 Ensembl transcripts including schematic representations: ENST00000315332
ENST00000357585
|
Expression for SSTR2
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| SSTR2 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for SSTR2
1 / 2 / 3 8 probe-sets matching SSTR2 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: --
SOURCE GeneReport for Unigene cluster: Hs.514451
Expression variation in blood from EXPOLDB for SSTR2 UniProtKB/Swiss-Prot: SSR2_HUMAN, P30874Tissue specificity: Cerebrum and kidney. In lesser amounts in jejunum, colon and liver |
Orthologs for SSTR2
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for SSTR2 gene from 5/11 species (see all 11
)
About this table Species with no ortholog for SSTR2
ENSEMBL Gene Tree for SSTR2 | Paralogs for SSTR2(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for SSTR2 gene
- SSTR32 SSTR52 SSTR12 SSTR42
|
SNPs/Variants for SSTR2(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for SSTR2 (up to first 250kb)
|
Disorders & Mutations for SSTR2
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 182452
10/47 Novoseek disease relationships for SSTR2 gene (see all 47
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| neuroendocrine tumors |
71.45 |
11 |
10718213 (2), 16135387 (1), 19245777 (1), 10699810 (1) (see all 8) |
| pituitary adenoma |
69.70 |
11 |
8866248 (4), 11264647 (1), 11399907 (1), 15472224 (1) (see all 7) |
| acromegaly |
67.13 |
8 |
15914528 (2), 10207690 (1), 15077912 (1), 17941904 (1) (see all 5) |
| prolactinoma |
63.08 |
6 |
16595604 (1), 9410919 (1), 8106629 (1), 16625843 (1) (see all 5) |
| carcinoid |
61.70 |
15 |
9622077 (2), 12734860 (2), 8653698 (2), 8132773 (1) (see all 9) |
| thyroid carcinoma medullary |
61.53 |
6 |
12734860 (2), 15077916 (1), 8012966 (1), 11344221 (1) |
| adenoma |
60.01 |
52 |
11399907 (5), 14661732 (4), 9059557 (3), 8866248 (3) (see all 21) |
| tumors |
59.49 |
172 |
10768564 (4), 7854974 (4), 8012966 (4), 16470879 (4) (see all 82) |
| glucagonoma |
59.12 |
4 |
8132773 (1), 12021920 (1) |
| insulinoma |
58.98 |
6 |
8132773 (1), 16479142 (1), 12021920 (1), 14602773 (1) (see all 5) |
About this table
Human Gene Mutation Database: SSTR2 Genetic Association Database: SSTR2 Human Genome Epidemiology Navigator: SSTR2 (6 documents)
|
Medical News for SSTR2(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for SSTR2 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/332 PubMed articles for SSTR2 gene (see all 332
):- Analysis of somatostatin receptors 2 and 5 polymorphisms in patients with acromegaly. (PubMed id 15914528)1, 3, 6 Filopanti M....Spada A. (2005)
- Cloning and functional characterization of a family of human and mouse somatostatin receptors expressed in brain, gastrointestinal tract, and kidney. (PubMed id 1346068)1, 3, 4 Yamada Y.... Seino S. (1992)
- Human somatostatin receptor genes: localization to human chromosomes 14, 17, and 22 and identification of simple tandem repeat polymorphisms. (PubMed id 8449518)1, 2, 3 Yamada Y....Bell G.I. (1993)
- Genetic variation in the growth hormone synthesis pathway in relation to circulating insulin-like growth factor-I, insulin-like growth factor binding protein-3, and breast cancer risk: results from the European prospective investigation into cancer and nutrition study. (PubMed id 16214911)1, 3, 6 Canzian F....Kaaks R. (2005)
- Multiple gene transcripts of the somatostatin receptor SSTR2: tissue selective distribution and cAMP regulation. (PubMed id 8386508)1, 3, 4 Patel Y.C.... Srikant C.B. (1993)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)3, 4 Ota T....Sugano S. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Somatostatin receptor interacting protein defines a novel family of multidomain proteins present in human and rodent brain. (PubMed id 10551867)3, 4 Zitzer H.... Kreienkamp H.-J. (1999)
- Genomic structure and transcriptional regulation of the human somatostatin receptor type 2. (PubMed id 10619399)3, 4 Petersenn S.... Schulte H.M. (1999)
- Cell growth inhibition and functioning of human somatostatin receptor type 2 are modulated by receptor heterodimerization. (PubMed id 18653781)1, 3 Grant M....Kumar U. (2008)
|
Search for SSTR2
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing SSTR2
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing SSTR2
(According to HUGE)
About This Section
| -- |
Specialized Databases showing SSTR2(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for SSTR2(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for SSTR2:

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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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