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Aliases & Descriptions for SSTR1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| | | Descriptions |
|---|
| G-protein coupled receptor 2 | | somatostatin receptor 1 2 |
|
| | Search outside databases for aliases for SSTR1 genePrevious GC identifers: GC14P036059 GC14P032534 GC14P036668 GC14P036667 |
Summaries for SSTR1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for SSTR1: Somatostatin acts at many sites to inhibit the release of many hormones and other secretory proteins. The biological effects of somatostatin are probably mediated by a family of G protein-coupled receptors that are expressed in a tissue-specific manner. The encoded protein is a member of the superfamily of somatostatin receptors having seven transmembrane segments, and is expressed in highest levels in jejunum and stomach. [provided by RefSeq] UniProtKB/Swiss-Prot: SSR1_HUMAN, P30872Function: Receptor for somatostatin with higher affinity for somatostatin-14 than -28. This receptor is coupled via pertussis toxin sensitive G proteins to inhibition of adenylyl cyclase. In addition it stimulates phosphotyrosine phosphatase and Na(+)/H(+) exchanger via pertussis toxin insensitive G proteinsGene Wiki entry for SSTR1 (Somatostatin_receptor_1) |
Genomic Location for SSTR1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the SSTR1 gene 
Entrez Gene cytogenetic band: 14q13 Ensembl cytogenetic band: 14q21.1 HGNC cytogenetic band: 14q13SSTR1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 14 GeneLoc Exon Structure GeneLoc location for GC14P037746:
(about GC identifiers)
Start:
|
37,746,955 bp from pter |
End:
|
37,752,019 bp from pter |
Size:
|
5,065 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000014.7 NT_026437.11
| Proteins for SSTR1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: SSR1_HUMAN, P30872 (See
protein sequence)Recommended Name: Somatostatin receptor type 1 Size: 391 amino acids; 42686 Da
Subunit: Interacts with SKB1
Subcellular location: Cell membrane; Multi-pass membrane proteinREFSEQ proteins: NP_001040.1
ENSEMBL proteins: ENSP00000379570 ENSP00000267377
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for SSTR1: Assays for SSTR1: | Protein
Domains/ Families for SSTR1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P30872
ProtoNet protein and cluster: P30872 2 Blocks protein families: IPB000586 Somatostatin receptor signature IPB001116 Somatostatin receptor type 1 signature
UniProtKB/Swiss-Prot: SSR1_HUMAN, P30872Similarity: Belongs to the G-protein coupled receptor 1 family | Gene Function for SSTR1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|                OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): BC035618
Applied Biosystems Silencer® siRNAs for SSTR1
Sigma-Aldrich siRNA and siRNA Panels for SSTR1  Sigma-Aldrich shRNA Panels and shRNA for SSTR1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001049                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001049                                  untagged cDNA clones in CMV expression vector (see all 2): BC035618 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: BC035618
UniProtKB/Swiss-Prot: SSR1_HUMAN, P30872Function: Receptor for somatostatin with higher affinity for somatostatin-14 than -28. This receptor is coupled via pertussis toxin sensitive G proteins to inhibition of adenylyl cyclase. In addition it stimulates phosphotyrosine phosphatase and Na(+)/H(+) exchanger via pertussis toxin insensitive G proteinsGenatlas biochemistry entry for SSTR1:somatostatin receptor gene 1,G protein coupled receptor superfamily4 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Sstr1):
3 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for SSTR1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
Gene Network CentralTM Interacting Genes and Proteins Network for SSTR1 
5/11 Interacting proteins for SSTR1 (ENSP000002673773) via UniProtKB, MINT, and/or STRING (see all 11
)About this table
5/7 Gene Ontology (GO) biological process terms (links to tree view) (see all 7
): About this table
|
Drugs & Compounds for SSTR1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  | Sigma-Aldrich Small Molecules for SSTR1: Antagonist |
Compounds for SSTR1 available from Tocris Bioscience
| Compound | Action |
CAS
number |
|---|
| Somatostatin | Influences growth hormone release | [51110-01-1] | | RC 160 | Somatostatin analog | [103222-11-3] | | Cyclosomatostatin | Non-selective sst receptor antagonist | [84211-54-1] | About this table
9 Novoseek chemical compound relationships for SSTR1 gene
About this table
|
Transcripts for SSTR1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|                OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): BC035618
Sigma-Aldrich siRNA and siRNA Panels for SSTR1  Sigma-Aldrich shRNA Panels and shRNA for SSTR1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001049 REFSEQ mRNAs for SSTR1 gene: NM_001049.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001049               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001049                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001049                                  untagged cDNA clones in CMV expression vector (see all 2): BC035618  Additional cDNA sequence: AK290868.1 BC035618.1 BX248780.1 1 DOTS entry: DT.205737 24/48 AceView cDNA sequences (see all 48
):CK821227 BX280512 AA350521 BU071007 BU070951 CK821228 NM_001049 BI789177 BC035618 BX248780 AA889113 BU071151 BF876598 F13186 BF878834 AW163607 BI962657 BU072963 F11022 AI129156 BI753905 AW051270 BX372173 R52599
highest scoring ESTs for SSTR1:AI129156 T65201 AA350521 AA889113 AA977679 AI815754 AW051270 AW162959 AW163607 AW954584 Unigene Cluster for SSTR1: Somatostatin receptor 1 Hs.248160 [show with all ESTs]Unigene Representative Sequence: NM_001049
GeneLoc Exon Structure
2 Ensembl transcripts including schematic representations: ENST00000396273
ENST00000267377
|
Expression for SSTR1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| SSTR1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for SSTR1
1 / 2 / 3 6 probe-sets matching SSTR1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: ATATACAATG
SOURCE GeneReport for Unigene cluster: Hs.248160 UniProtKB/Swiss-Prot: SSR1_HUMAN, P30872Tissue specificity: Fetal kidney, fetal liver, and adult pancreas, brain, lung, jejunum and stomach |
Orthologs for SSTR1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for SSTR1 gene from 5/9 species (see all 9
)
About this table Species with no ortholog for SSTR1
ENSEMBL Gene Tree for SSTR1 | Paralogs for SSTR1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for SSTR1 gene
- SSTR32 SSTR52 SSTR22 SSTR42
|
SNPs/Variants for SSTR1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for SSTR1 (up to first 250kb)
|
Disorders & Mutations for SSTR1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 182451
10/24 Novoseek disease relationships for SSTR1 gene (see all 24
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| pituitary adenoma nonfunctioning |
72.21 |
2 |
15472224 (1) |
| prolactinoma |
66.05 |
6 |
10487698 (2), 18426817 (2), 8106629 (1), 16625843 (1) |
| pituitary adenoma |
65.52 |
7 |
12788890 (2), 8866248 (1), 17473207 (1), 12721506 (1) (see all 5) |
| pituitary tumors |
59.47 |
9 |
15103227 (4), 7530798 (1), 16379036 (1), 8106629 (1) |
| carcinoid |
57.25 |
3 |
8132773 (1), 16508627 (1), 8653698 (1) |
| insulinoma |
55.05 |
5 |
8132773 (1), 12181718 (1), 11772967 (1), 10866997 (1) |
| thyroid carcinoma medullary |
53.95 |
4 |
15077916 (1), 11344221 (1), 12359227 (1) |
| acromegaly |
46.04 |
1 |
15103227 (1) |
| adenoma |
44.44 |
11 |
12788890 (2), 17420609 (2), 10690891 (1), 12721506 (1) (see all 5) |
| tumors |
43.73 |
49 |
18823376 (3), 7530798 (2), 8012966 (2), 8515684 (2) (see all 26) |
About this table
Genetic Association Database: SSTR1 Human Genome Epidemiology Navigator: SSTR1 (3 documents)
|
Medical News for SSTR1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for SSTR1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/159 PubMed articles for SSTR1 gene (see all 159
):- Cloning and functional characterization of a family of human and mouse somatostatin receptors expressed in brain, gastrointestinal tract, and kidney. (PubMed id 1346068)1, 3, 4 Yamada Y.... Seino S. (1992)
- Interaction of the somatostatin receptor subtype 1 with the human homolog of the Shk1 kinase-binding protein from yeast. (PubMed id 10734105)1, 3, 4 Schwaerzler A.... Richter D. (2000)
- Human somatostatin receptor genes: localization to human chromosomes 14, 17, and 22 and identification of simple tandem repeat polymorphisms. (PubMed id 8449518)1, 2, 3 Yamada Y....Bell G.I. (1993)
- Genetic variation in the growth hormone synthesis pathway in relation to circulating insulin-like growth factor-I, insulin-like growth factor binding protein-3, and breast cancer risk: results from the European prospective investigation into cancer and nutrition study. (PubMed id 16214911)3, 6 Canzian F....Kaaks R. (2005)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Somatostatin receptor-1 induces cell cycle arrest and inhibits tumor growth in pancreatic cancer. (PubMed id 18823376)1, 3 Li M....Fisher W.E. (2008)
- Somatostatin receptor subtype 1 selective activation in human growth hormone (GH)- and prolactin (PRL)-secreting pituitary adenomas: effects on cell viability, GH, and PRL secretion. (PubMed id 12788890)1, 3 Zatelli M.C....degli Uberti E.C. (2003)
- Subtype-selective expression of the five somatostatin receptors (hSSTR1-5) in human pancreatic islet cells: a quantitative double-label immunohistochemical analysis. (PubMed id 9892225)1, 3 Kumar U....Patel Y.C. (1999)
- Somatostatin receptor gene expression in human ocular tissues: RT-PCR and immunohistochemical study. (PubMed id 11527930)1, 3 Klisovic D.D....Lubow M. (2001)
- Gene expression of somatostatin receptor subtypes, SSTR1 and SSTR2, in human lung cancer cell lines. (PubMed id 7968260)1, 3 Fujita T....Takahara J. (1994)
|
Search for SSTR1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing SSTR1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing SSTR1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing SSTR1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for SSTR1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for SSTR1:

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| | | | Tocris compounds for SSTR1 |
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Incremental update: 13 Oct 2009
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