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Aliases for SSSCA1-AS1 Gene

Subcategory (RNA class) for SSSCA1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SSSCA1-AS1 Gene

  • SSSCA1 Antisense RNA 1 (Head To Head) 2 3 5

External Ids for SSSCA1-AS1 Gene

Previous GeneCards Identifiers for SSSCA1-AS1 Gene

  • GC11M065338

Summaries for SSSCA1-AS1 Gene

GeneCards Summary for SSSCA1-AS1 Gene

SSSCA1-AS1 (SSSCA1 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SSSCA1-AS1 Gene

Genomics for SSSCA1-AS1 Gene

Regulatory Elements for SSSCA1-AS1 Gene

Promoters for SSSCA1-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around SSSCA1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SSSCA1-AS1 Gene

Chromosome:
11
Start:
65,568,482 bp from pter
End:
65,570,423 bp from pter
Size:
1,942 bases
Orientation:
Minus strand

Genomic View for SSSCA1-AS1 Gene

Genes around SSSCA1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SSSCA1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SSSCA1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SSSCA1-AS1 Gene

Proteins for SSSCA1-AS1 Gene

Post-translational modifications for SSSCA1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SSSCA1-AS1 Gene

Domains & Families for SSSCA1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SSSCA1-AS1 Gene

Function for SSSCA1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SSSCA1-AS1 Gene

Localization for SSSCA1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SSSCA1-AS1 Gene

Pathways & Interactions for SSSCA1-AS1 Gene

SuperPathways for SSSCA1-AS1 Gene

No Data Available

Interacting Proteins for SSSCA1-AS1 Gene

Gene Ontology (GO) - Biological Process for SSSCA1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SSSCA1-AS1 Gene

Drugs & Compounds for SSSCA1-AS1 Gene

No Compound Related Data Available

Transcripts for SSSCA1-AS1 Gene

mRNA/cDNA for SSSCA1-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SSSCA1-AS1 Gene

No ASD Table

Relevant External Links for SSSCA1-AS1 Gene

GeneLoc Exon Structure for
SSSCA1-AS1
ECgene alternative splicing isoforms for
SSSCA1-AS1

Expression for SSSCA1-AS1 Gene

mRNA expression in normal human tissues for SSSCA1-AS1 Gene

genes like me logo Genes that share expression patterns with SSSCA1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SSSCA1-AS1 Gene

Orthologs for SSSCA1-AS1 Gene

Evolution for SSSCA1-AS1 Gene

ENSEMBL:
Gene Tree for SSSCA1-AS1 (if available)
TreeFam:
Gene Tree for SSSCA1-AS1 (if available)

No data available for Orthologs for SSSCA1-AS1 Gene

Paralogs for SSSCA1-AS1 Gene

No data available for Paralogs for SSSCA1-AS1 Gene

Variants for SSSCA1-AS1 Gene

Relevant External Links for SSSCA1-AS1 Gene

HapMap Linkage Disequilibrium report
SSSCA1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SSSCA1-AS1 Gene

Disorders for SSSCA1-AS1 Gene

Relevant External Links for SSSCA1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SSSCA1-AS1

No disorders were found for SSSCA1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SSSCA1-AS1 Gene

Publications for SSSCA1-AS1 Gene

  1. Meta-analysis of genome-wide association studies identifies novel loci that influence cupping and the glaucomatous process. (PMID: 25241763) Springelkamp H. … Hammond C.J. (Nat Commun 2014) 3 67
  2. Hundreds of variants clustered in genomic loci and biological pathways affect human height. (PMID: 20881960) Lango Allen H. … Hirschhorn J.N. (Nature 2010) 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for SSSCA1-AS1 Gene

Sources for SSSCA1-AS1 Gene

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