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Aliases for SSR1P2 Gene

Subcategory (RNA class) for SSR1P2 Gene

lncRNA

Aliases for SSR1P2 Gene

  • Signal Sequence Receptor Subunit 1 Pseudogene 2 2 3 5
  • Signal Sequence Receptor, Alpha Pseudogene 2 2

External Ids for SSR1P2 Gene

ORGUL Members for SSR1P2 Gene

Previous GeneCards Identifiers for SSR1P2 Gene

  • GC13P075711

Summaries for SSR1P2 Gene

GeneCards Summary for SSR1P2 Gene

SSR1P2 (Signal Sequence Receptor Subunit 1 Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SSR1P2 Gene

Genomics for SSR1P2 Gene

Regulatory Elements for SSR1P2 Gene

Enhancers for SSR1P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13G075133 0.7 ENCODE 0.7 -0.8 -758 2.9 ZNF362 ZBTB21 JUN HLF ZIC2 JUND MAFF ZNF629 FOS MAFK SSR1P2 RNU6-38P
GH13G075219 1 Ensembl ENCODE 0.2 +83.7 83747 0.6 CTCF RB1 RAD21 ZNF101 CBX5 ZNF143 SMC3 ZNF391 ZNF654 NRF1 CTAGE11P SSR1P2
GH13G075194 0.7 ENCODE 0.2 +59.7 59713 3.0 CTCF PKNOX1 FOXA2 FEZF1 EP300 NR2F2 MAFF POLR2A SMARCA4 MAFK CTAGE11P SSR1P2
GH13G075223 0.7 ENCODE 0.2 +88.4 88385 2.4 PKNOX1 FOXA2 MAX RAD21 YY1 ARID3A POLR2A FOS MTA2 NR2F1 CTAGE11P SSR1P2
GH13G075180 0.6 ENCODE 0.2 +45.5 45514 2.1 NFIB JUN EP300 JUND GATA3 GATA2 STAT3 FOS RCOR1 SSR1P2 CTAGE11P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SSR1P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for SSR1P2 Gene

Chromosome:
13
Start:
75,136,154 bp from pter
End:
75,136,940 bp from pter
Size:
787 bases
Orientation:
Plus strand

Genomic View for SSR1P2 Gene

Genes around SSR1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SSR1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SSR1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SSR1P2 Gene

Proteins for SSR1P2 Gene

Post-translational modifications for SSR1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SSR1P2 Gene

Domains & Families for SSR1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SSR1P2 Gene

Function for SSR1P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SSR1P2 Gene

Localization for SSR1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SSR1P2 Gene

Pathways & Interactions for SSR1P2 Gene

SuperPathways for SSR1P2 Gene

No Data Available

Interacting Proteins for SSR1P2 Gene

Gene Ontology (GO) - Biological Process for SSR1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SSR1P2 Gene

Drugs & Compounds for SSR1P2 Gene

No Compound Related Data Available

Transcripts for SSR1P2 Gene

mRNA/cDNA for SSR1P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SSR1P2 Gene

No ASD Table

Relevant External Links for SSR1P2 Gene

GeneLoc Exon Structure for
SSR1P2
ECgene alternative splicing isoforms for
SSR1P2

Expression for SSR1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SSR1P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of SSR1P2 Gene:

SSR1P2
genes like me logo Genes that share expression patterns with SSR1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SSR1P2 Gene

Orthologs for SSR1P2 Gene

Evolution for SSR1P2 Gene

ENSEMBL:
Gene Tree for SSR1P2 (if available)
TreeFam:
Gene Tree for SSR1P2 (if available)

No data available for Orthologs for SSR1P2 Gene

Paralogs for SSR1P2 Gene

No data available for Paralogs for SSR1P2 Gene

Variants for SSR1P2 Gene

Relevant External Links for SSR1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SSR1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SSR1P2 Gene

Disorders for SSR1P2 Gene

No disorders were found for SSR1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SSR1P2 Gene

Publications for SSR1P2 Gene

No publications were found for SSR1P2 Gene.

Products for SSR1P2 Gene

Sources for SSR1P2 Gene

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