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Aliases for SSR1P1 Gene

Subcategory (RNA class) for SSR1P1 Gene

antisense

Aliases for SSR1P1 Gene

  • Signal Sequence Receptor Subunit 1 Pseudogene 1 2 3 5
  • Signal Sequence Receptor, Alpha Pseudogene 1 2

External Ids for SSR1P1 Gene

ORGUL Members for SSR1P1 Gene

Previous GeneCards Identifiers for SSR1P1 Gene

  • GC06M150705

Summaries for SSR1P1 Gene

GeneCards Summary for SSR1P1 Gene

SSR1P1 (Signal Sequence Receptor Subunit 1 Pseudogene 1) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for SSR1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SSR1P1 Gene

Genomics for SSR1P1 Gene

Regulatory Elements for SSR1P1 Gene

Enhancers for SSR1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H150403 1.2 Ensembl ENCODE 0.4 -18.6 -18560 1 FEZF1 BRCA1 ZNF2 GLIS2 SP3 TSHZ1 REST ZNF518A ZNF610 GLIS1 IYD SSR1P1 LOC100420304
GH06H150417 1.6 FANTOM5 Ensembl ENCODE 0.3 -33.5 -33474 2 PKNOX1 FEZF1 ZNF2 CBX5 ZNF143 SP3 JUNB REST ZNF662 ZNF592 LATS1 RPS18P9 HSPA8P15 ENSG00000233330 PPIL4 NUP43 SSR1P1 LOC100420304
GH06H150395 0.7 ENCODE 0.4 -10.5 -10470 0 CTCF MAX ZNF2 RAD21 YY1 CTBP1 ZNF547 SMC3 ZNF143 KLF8 IYD SSR1P1 LOC100420304
GH06H150409 0.8 ENCODE 0.3 -24.6 -24633 0 NFIB INSM2 ZNF195 FEZF1 LCORL ZNF366 PATZ1 ZNF350 ZNF174 ZEB2 LATS1 RPS18P9 ENSG00000216906 ENSG00000268592 PPIL4 ENSG00000233330 ENSG00000202343 LRP11 NUP43 ZBTB2
GH06H150383 0.3 FANTOM5 0.7 +1.1 1148 0 IYD ENSG00000238594 SSR1P1 GC06P150383
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SSR1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SSR1P1 Gene

Chromosome:
6
Start:
150,384,307 bp from pter
End:
150,385,120 bp from pter
Size:
814 bases
Orientation:
Minus strand

Genomic View for SSR1P1 Gene

Genes around SSR1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SSR1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SSR1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SSR1P1 Gene

Proteins for SSR1P1 Gene

Post-translational modifications for SSR1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SSR1P1 Gene

Domains & Families for SSR1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SSR1P1 Gene

Function for SSR1P1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SSR1P1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SSR1P1 Gene

Localization for SSR1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SSR1P1 Gene

Pathways & Interactions for SSR1P1 Gene

SuperPathways for SSR1P1 Gene

No Data Available

Interacting Proteins for SSR1P1 Gene

Gene Ontology (GO) - Biological Process for SSR1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SSR1P1 Gene

Drugs & Compounds for SSR1P1 Gene

No Compound Related Data Available

Transcripts for SSR1P1 Gene

mRNA/cDNA for SSR1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SSR1P1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for SSR1P1 Gene

No ASD Table

Relevant External Links for SSR1P1 Gene

GeneLoc Exon Structure for
SSR1P1
ECgene alternative splicing isoforms for
SSR1P1

Expression for SSR1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SSR1P1 Gene

mRNA differential expression in normal tissues according to GTEx for SSR1P1 Gene

This gene is overexpressed in Thyroid (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of SSR1P1 Gene:

SSR1P1
genes like me logo Genes that share expression patterns with SSR1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SSR1P1 Gene

Orthologs for SSR1P1 Gene

Evolution for SSR1P1 Gene

ENSEMBL:
Gene Tree for SSR1P1 (if available)
TreeFam:
Gene Tree for SSR1P1 (if available)

No data available for Orthologs for SSR1P1 Gene

Paralogs for SSR1P1 Gene

No data available for Paralogs for SSR1P1 Gene

Variants for SSR1P1 Gene

Relevant External Links for SSR1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SSR1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SSR1P1 Gene

Disorders for SSR1P1 Gene

No disorders were found for SSR1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SSR1P1 Gene

Publications for SSR1P1 Gene

No publications were found for SSR1P1 Gene.

Products for SSR1P1 Gene

Sources for SSR1P1 Gene

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