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Aliases for SSR1P1 Gene

Subcategory (RNA class) for SSR1P1 Gene

antisense

Aliases for SSR1P1 Gene

  • Signal Sequence Receptor Subunit 1 Pseudogene 1 2 3 5
  • Signal Sequence Receptor, Alpha Pseudogene 1 2

External Ids for SSR1P1 Gene

ORGUL Members for SSR1P1 Gene

Previous GeneCards Identifiers for SSR1P1 Gene

  • GC06M150705

Summaries for SSR1P1 Gene

GeneCards Summary for SSR1P1 Gene

SSR1P1 (Signal Sequence Receptor Subunit 1 Pseudogene 1) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SSR1P1 Gene

Genomics for SSR1P1 Gene

Regulatory Elements for SSR1P1 Gene

Enhancers for SSR1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F150417 1.6 FANTOM5 Ensembl ENCODE 0.3 -33.5 -33474 2.2 PKNOX1 FEZF1 ZNF48 ZNF2 GLIS2 GATA2 ZNF143 SP3 YY2 JUNB SSR1P1 LOC100420304
GH06F150383 0.5 FANTOM5 0.8 +1.1 1148 0.4 KLF1 KLF17 ATF2 IYD ENSG00000238594 GC06P150383 SSR1P1
GH06F150403 1.2 Ensembl ENCODE 0.3 -18.6 -18560 1.1 INSM2 KLF17 FEZF1 ZNF2 ZEB1 GLIS2 ZNF366 SCRT2 ZNF391 ZNF680 IYD SSR1P1 LOC100420304
GH06F150395 0.8 ENCODE 0.4 -10.5 -10470 0.1 CTCF MAX ZNF2 RAD21 YY1 ZNF547 ZNF143 SMC3 PRDM10 KLF8 IYD SSR1P1 LOC100420304
GH06F150409 0.9 Ensembl ENCODE 0.3 -24.7 -24664 0.8 INSM2 FEZF1 ZEB2 ZNF101 OSR2 ZNF366 PATZ1 MYNN PRDM10 ZXDB SSR1P1 LOC100420304
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SSR1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SSR1P1 Gene

Chromosome:
6
Start:
150,384,307 bp from pter
End:
150,385,120 bp from pter
Size:
814 bases
Orientation:
Minus strand

Genomic View for SSR1P1 Gene

Genes around SSR1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SSR1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SSR1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SSR1P1 Gene

Proteins for SSR1P1 Gene

Post-translational modifications for SSR1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SSR1P1 Gene

Domains & Families for SSR1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SSR1P1 Gene

Function for SSR1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SSR1P1 Gene

Localization for SSR1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SSR1P1 Gene

Pathways & Interactions for SSR1P1 Gene

SuperPathways for SSR1P1 Gene

No Data Available

Interacting Proteins for SSR1P1 Gene

Gene Ontology (GO) - Biological Process for SSR1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SSR1P1 Gene

Transcripts for SSR1P1 Gene

mRNA/cDNA for SSR1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SSR1P1 Gene

No ASD Table

Relevant External Links for SSR1P1 Gene

GeneLoc Exon Structure for
SSR1P1
ECgene alternative splicing isoforms for
SSR1P1

Expression for SSR1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SSR1P1 Gene

mRNA differential expression in normal tissues according to GTEx for SSR1P1 Gene

This gene is overexpressed in Thyroid (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of SSR1P1 Gene:

SSR1P1
genes like me logo Genes that share expression patterns with SSR1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SSR1P1 Gene

Orthologs for SSR1P1 Gene

Evolution for SSR1P1 Gene

ENSEMBL:
Gene Tree for SSR1P1 (if available)
TreeFam:
Gene Tree for SSR1P1 (if available)

No data available for Orthologs for SSR1P1 Gene

Paralogs for SSR1P1 Gene

No data available for Paralogs for SSR1P1 Gene

Variants for SSR1P1 Gene

Relevant External Links for SSR1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SSR1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SSR1P1 Gene

Disorders for SSR1P1 Gene

No disorders were found for SSR1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SSR1P1 Gene

Publications for SSR1P1 Gene

No publications were found for SSR1P1 Gene.

Products for SSR1P1 Gene

Sources for SSR1P1 Gene

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