Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SRRM3 Gene

Aliases for SRRM3 Gene

  • Serine/Arginine Repetitive Matrix 3 2 3

External Ids for SRRM3 Gene

Previous GeneCards Identifiers for SRRM3 Gene

  • GC07P075752
  • GC07P075831
  • GC07P070917

Summaries for SRRM3 Gene

GeneCards Summary for SRRM3 Gene

SRRM3 (Serine/Arginine Repetitive Matrix 3) is a Protein Coding gene. An important paralog of this gene is SRRM2.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SRRM3 Gene

Genomics for SRRM3 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for SRRM3 Gene

76,201,898 bp from pter
76,287,288 bp from pter
85,391 bases
Plus strand

Genomic View for SRRM3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SRRM3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SRRM3 Gene

No data available for Regulatory Elements for SRRM3 Gene

Proteins for SRRM3 Gene

  • Protein details for SRRM3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Serine/arginine repetitive matrix protein 3
    Protein Accession:
    Secondary Accessions:
    • A6ND75

    Protein attributes for SRRM3 Gene

    597 amino acids
    Molecular mass:
    65249 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SRRM3 Gene

Proteomics data for SRRM3 Gene at MOPED

Post-translational modifications for SRRM3 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for SRRM3 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for SRRM3 Gene

Domains for SRRM3 Gene

Protein Domains for SRRM3 Gene


Suggested Antigen Peptide Sequences for SRRM3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • A6NNA2
  • Belongs to the CWC21 family.
genes like me logo Genes that share domains with SRRM3: view

No data available for Gene Families for SRRM3 Gene

Function for SRRM3 Gene

Phenotypes for SRRM3 Gene

GenomeRNAi human phenotypes for SRRM3:
genes like me logo Genes that share phenotypes with SRRM3: view

miRNA for SRRM3 Gene

miRTarBase miRNAs that target SRRM3

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targeting and HOMER Transcription for SRRM3 Gene

Localization for SRRM3 Gene

Subcellular locations from

Jensen Localization Image for SRRM3 Gene COMPARTMENTS Subcellular localization image for SRRM3 gene
Compartment Confidence
nucleus 3
cytosol 2
cytoskeleton 1
plasma membrane 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for SRRM3 Gene

Pathways for SRRM3 Gene

SuperPathways for SRRM3 Gene

No Data Available

Interacting Proteins for SRRM3 Gene

Gene Ontology (GO) - Biological Process for SRRM3 Gene


No data available for Pathways by source for SRRM3 Gene

Transcripts for SRRM3 Gene

Unigene Clusters for SRRM3 Gene

Serine/arginine repetitive matrix 3:
Representative Sequences:

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SRRM3

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SRRM3 Gene

No ASD Table

Relevant External Links for SRRM3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SRRM3 Gene

mRNA expression in normal human tissues for SRRM3 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for SRRM3 Gene

This gene is overexpressed in Brain - Cerebellum (10.7) and Brain - Cerebellar Hemisphere (10.7).

Protein differential expression in normal tissues for SRRM3 Gene

This gene is overexpressed in Liver, secretome (38.5), Adipocyte (12.8), Saliva (10.7), and Peripheral blood mononuclear cells (6.7).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for SRRM3 Gene

SOURCE GeneReport for Unigene cluster for SRRM3 Gene Hs.511025

genes like me logo Genes that share expressions with SRRM3: view

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt and Expression partners for SRRM3 Gene

Orthologs for SRRM3 Gene

This gene was present in the common ancestor of animals.

Orthologs for SRRM3 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SRRM3 35
  • 99.39 (n)
  • 98.77 (a)
SRRM3 36
  • 98 (a)
(Mus musculus)
Mammalia Srrm3 16
Srrm3 36
  • 78 (a)
(Bos Taurus)
Mammalia SRRM3 36
  • 65 (a)
(Canis familiaris)
Mammalia SRRM3 36
  • 65 (a)
(Monodelphis domestica)
Mammalia SRRM3 36
  • 53 (a)
(Ornithorhynchus anatinus)
Mammalia SRRM3 36
  • 44 (a)
(Gallus gallus)
Aves SRRM3 36
  • 50 (a)
(Anolis carolinensis)
Reptilia SRRM3 36
  • 50 (a)
(Danio rerio)
Actinopterygii srrm2 36
  • 11 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG7971 36
  • 6 (a)
(Caenorhabditis elegans)
Secernentea rsr-2 36
  • 21 (a)
Species with no ortholog for SRRM3:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for SRRM3 Gene

Gene Tree for SRRM3 (if available)
Gene Tree for SRRM3 (if available)

Paralogs for SRRM3 Gene

Paralogs for SRRM3 Gene

Selected SIMAP similar genes for SRRM3 Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with SRRM3: view

Variants for SRRM3 Gene

Sequence variations from dbSNP and Humsavar for SRRM3 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs1859790 -- 76,286,756(+) AAGTC(A/G)TTCAC utr-variant-3-prime
rs1859795 -- 76,248,036(+) TGAAG(A/G)CCTGG intron-variant
rs1894760 -- 76,222,822(+) ggctg(A/G)ccagg intron-variant
rs1894761 -- 76,247,436(+) TGTCA(C/T)GGAGG intron-variant
rs2079477 -- 76,207,231(+) TAGGA(C/G)TTCAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SRRM3 Gene

Variant ID Type Subtype PubMed ID
nsv528969 CNV Gain 19592680
essv14753 CNV CNV 17122850
dgv120n16 CNV Deletion 17901297
dgv2104e1 CNV Complex 17122850
esv2734682 CNV Deletion 23290073
esv2734684 CNV Deletion 23290073
nsv888387 CNV Loss 21882294
nsv888388 CNV Loss 21882294
nsv519194 CNV Loss 19592680
esv2422494 CNV Duplication 17116639

Relevant External Links for SRRM3 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SRRM3 Gene

Disorders for SRRM3 Gene

No disorders were found for SRRM3 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for SRRM3 Gene

Publications for SRRM3 Gene

  1. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier L.W. … Wilson R.K. (Nature 2003) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for SRRM3 Gene

Sources for SRRM3 Gene

Back to Top