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Aliases for SRRM2-AS1 Gene

Subcategory (RNA class) for SRRM2-AS1 Gene

antisense

Quality Score for this RNA gene is

13

Aliases for SRRM2-AS1 Gene

  • SRRM2 Antisense RNA 1 2 3
  • SRRM2 Antisense RNA 1 (Non-Protein Coding) 2 3
  • CTD-2270P14.3 3

External Ids for SRRM2-AS1 Gene

ORGUL Members for SRRM2-AS1 Gene

Previous GeneCards Identifiers for SRRM2-AS1 Gene

  • GC16M002790

Summaries for SRRM2-AS1 Gene

GeneCards Summary for SRRM2-AS1 Gene

SRRM2-AS1 (SRRM2 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SRRM2-AS1 Gene

Genomics for SRRM2-AS1 Gene

Genomic Location for SRRM2-AS1 Gene

Start:
2,737,076 bp from pter
End:
2,752,600 bp from pter
Size:
15,525 bases
Orientation:
Minus strand

Genomic View for SRRM2-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SRRM2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SRRM2-AS1 Gene

No data available for Regulatory Elements for SRRM2-AS1 Gene

Proteins for SRRM2-AS1 Gene

Post-translational modifications for SRRM2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SRRM2-AS1 Gene

Domains for SRRM2-AS1 Gene

Gene Families for SRRM2-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SRRM2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SRRM2-AS1 Gene

Function for SRRM2-AS1 Gene

miRNA for SRRM2-AS1 Gene

miRTarBase miRNAs that target SRRM2-AS1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for SRRM2-AS1 Gene

Localization for SRRM2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SRRM2-AS1 Gene

Pathways for SRRM2-AS1 Gene

SuperPathways for SRRM2-AS1 Gene

No Data Available

Interacting Proteins for SRRM2-AS1 Gene

Gene Ontology (GO) - Biological Process for SRRM2-AS1 Gene

None

No data available for Pathways by source for SRRM2-AS1 Gene

Transcripts for SRRM2-AS1 Gene

mRNA/cDNA for SRRM2-AS1 Gene

(5) Additional mRNA sequences :
(8) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SRRM2-AS1 Gene

SRRM2 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SRRM2-AS1 Gene

No ASD Table

Relevant External Links for SRRM2-AS1 Gene

GeneLoc Exon Structure for
SRRM2-AS1
ECgene alternative splicing isoforms for
SRRM2-AS1

Expression for SRRM2-AS1 Gene

mRNA expression in normal human tissues for SRRM2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for SRRM2-AS1 Gene

This gene is overexpressed in Testis (19.9).

SOURCE GeneReport for Unigene cluster for SRRM2-AS1 Gene Hs.311208

genes like me logo Genes that share expressions with SRRM2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for SRRM2-AS1 Gene

Orthologs for SRRM2-AS1 Gene

Evolution for SRRM2-AS1 Gene

ENSEMBL:
Gene Tree for SRRM2-AS1 (if available)
TreeFam:
Gene Tree for SRRM2-AS1 (if available)

No data available for Orthologs for SRRM2-AS1 Gene

Paralogs for SRRM2-AS1 Gene

No data available for Paralogs for SRRM2-AS1 Gene

Variants for SRRM2-AS1 Gene

Sequence variations from dbSNP and Humsavar for SRRM2-AS1 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs2051828 -- 2,748,608(-) agtgg(C/T)gcgat intron-variant
rs2079208 -- 2,748,330(-) CTTTG(A/T)AAGAG intron-variant
rs3094783 -- 2,748,928(-) GCACA(C/T)CTGGT intron-variant
rs3094786 -- 2,740,067(-) GGGGG(A/C)CAGTG intron-variant
rs3094787 -- 2,739,729(-) TGTGG(A/G)AGGGG intron-variant

Relevant External Links for SRRM2-AS1 Gene

HapMap Linkage Disequilibrium report
SRRM2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for SRRM2-AS1 Gene

Disorders for SRRM2-AS1 Gene

No disorders were found for SRRM2-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for SRRM2-AS1 Gene

Publications for SRRM2-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for SRRM2-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SRRM2-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SRRM2-AS1
    • Block miRNA regulation of SRRM2-AS1 using miScript Target Protectors

    Sources for SRRM2-AS1 Gene

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