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Aliases for SRRM1P1 Gene

Aliases for SRRM1P1 Gene

  • Serine/Arginine Repetitive Matrix 1 Pseudogene 1 2 3
  • Serine/Arginine Repetitive Matrix 1 Pseudogene 2
  • Serine/Arginine Repetitive Matrix 1-Like 2
  • AC020688.1 5
  • SRRM1L 3
  • SRRM1P 3

External Ids for SRRM1P1 Gene

Previous HGNC Symbols for SRRM1P1 Gene

  • SRRM1L
  • SRRM1P

Previous GeneCards Identifiers for SRRM1P1 Gene

  • GC08M128100

Summaries for SRRM1P1 Gene

GeneCards Summary for SRRM1P1 Gene

SRRM1P1 (Serine/Arginine Repetitive Matrix 1 Pseudogene 1) is a Pseudogene.

Additional gene information for SRRM1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SRRM1P1 Gene

Genomics for SRRM1P1 Gene

GeneHancer (GH) Regulatory Elements for SRRM1P1 Gene

Promoters and enhancers for SRRM1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I127857 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 124.7 -771.4 -771408 4.4 HDGF PKNOX1 CLOCK ARNT ZFP64 NEUROD1 SIN3A ZBTB7B ZNF213 E2F8 SRRM1P1 RNU1-106P ENSG00000278324 MIR1204 PVT1
GH08I127863 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 89 -779.8 -779802 10.2 HDGF ATF1 PKNOX1 CLOCK NEUROD1 SIN3A YBX1 ZBTB7B YY1 ETS1 SRRM1P1 RNU1-106P MIR1204 PVT1 CASC11 MYC TMEM75 RNU4-25P ENSG00000278324
GH08I127732 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 55.9 -649.6 -649572 11.6 ZFP64 IRF4 YY1 E2F8 ZNF143 ZNF263 SP3 NFYC SSRP1 ZNF610 GC08P127736 GC08P127737 MYC SRRM1P1 RNU1-106P MIR1204 PVT1 TMEM75 CASC11 GC08P127740
GH08I127862 Enhancer 1 ENCODE dbSUPER 112.2 -774.4 -774360 0.2 ZFP64 ZNF140 ZNF266 ETS1 ZEB1 ZNF697 ZNF664 ZNF354C ZNF138 GLI2 SRRM1P1 RNU1-106P ENSG00000278324 MIR1204 PVT1
GH08I127799 Enhancer 1.4 Ensembl ENCODE dbSUPER 79.1 -713.1 -713098 5.1 HDGF PKNOX1 CLOCK FOXA2 ARNT ZFP64 NEUROD1 SIN3A ZBTB7B ZNF766 SRRM1P1 RNU1-106P MYC CASC11 TMEM75 MIR1207 PVT1 MIR1204 ENSG00000278324
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SRRM1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SRRM1P1 Gene

Genomic Locations for SRRM1P1 Gene
chr8:127,086,262-127,088,530
(GRCh38/hg38)
Size:
2,269 bases
Orientation:
Minus strand
chr8:128,099,755-128,100,775
(GRCh37/hg19)

Genomic View for SRRM1P1 Gene

Genes around SRRM1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SRRM1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SRRM1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SRRM1P1 Gene

Proteins for SRRM1P1 Gene

Post-translational modifications for SRRM1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SRRM1P1 Gene

Domains & Families for SRRM1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SRRM1P1 Gene

Function for SRRM1P1 Gene

Phenotypes From GWAS Catalog for SRRM1P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SRRM1P1 Gene

Localization for SRRM1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SRRM1P1 Gene

Pathways & Interactions for SRRM1P1 Gene

SuperPathways for SRRM1P1 Gene

No Data Available

Interacting Proteins for SRRM1P1 Gene

Gene Ontology (GO) - Biological Process for SRRM1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SRRM1P1 Gene

Drugs & Compounds for SRRM1P1 Gene

No Compound Related Data Available

Transcripts for SRRM1P1 Gene

mRNA/cDNA for SRRM1P1 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SRRM1P1 Gene

No ASD Table

Relevant External Links for SRRM1P1 Gene

GeneLoc Exon Structure for
SRRM1P1
ECgene alternative splicing isoforms for
SRRM1P1

Expression for SRRM1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SRRM1P1 Gene

mRNA expression in normal human tissues for SRRM1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SRRM1P1 Gene:

SRRM1P1
genes like me logo Genes that share expression patterns with SRRM1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SRRM1P1 Gene

Orthologs for SRRM1P1 Gene

Evolution for SRRM1P1 Gene

ENSEMBL:
Gene Tree for SRRM1P1 (if available)
TreeFam:
Gene Tree for SRRM1P1 (if available)

No data available for Orthologs for SRRM1P1 Gene

Paralogs for SRRM1P1 Gene

No data available for Paralogs for SRRM1P1 Gene

Variants for SRRM1P1 Gene

Additional Variant Information for SRRM1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SRRM1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SRRM1P1 Gene

Disorders for SRRM1P1 Gene

Additional Disease Information for SRRM1P1

No disorders were found for SRRM1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SRRM1P1 Gene

Publications for SRRM1P1 Gene

  1. Genetic variation in prostate-specific antigen-detected prostate cancer and the effect of control selection on genetic association studies. (PMID: 24753544) Knipe DW … Martin RM (Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 2014) 3 58
  2. Genome-wide association study identifies new prostate cancer susceptibility loci. (PMID: 21743057) Schumacher FR … Kraft P (Human molecular genetics 2011) 44 58
  3. Common variant in 6q26-q27 is associated with distal colon cancer in an Asian population. (PMID: 21242260) Cui R … Matsuda K (Gut 2011) 44 58
  4. Genome-wide association study identifies five new susceptibility loci for prostate cancer in the Japanese population. (PMID: 20676098) Takata R … Nakagawa H (Nature genetics 2010) 44 58
  5. Common variants at 2q37.3, 8q24.21, 15q21.3 and 16q24.1 influence chronic lymphocytic leukemia risk. (PMID: 20062064) Crowther-Swanepoel D … Houlston RS (Nature genetics 2010) 44 58

Products for SRRM1P1 Gene

Sources for SRRM1P1 Gene

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