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Aliases for SRP14-AS1 Gene

Subcategory (RNA class) for SRP14-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for SRP14-AS1 Gene

  • SRP14 Antisense RNA1 (Head To Head) 2 3

External Ids for SRP14-AS1 Gene

Summaries for SRP14-AS1 Gene

GeneCards Summary for SRP14-AS1 Gene

SRP14-AS1 (SRP14 Antisense RNA1 (Head To Head)) is an RNA Gene, and belongs to the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SRP14-AS1 Gene

Genomics for SRP14-AS1 Gene

Genomic Location for SRP14-AS1 Gene

Start:
40,039,311 bp from pter
End:
40,067,509 bp from pter
Size:
28,199 bases
Orientation:
Plus strand

Genomic View for SRP14-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SRP14-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SRP14-AS1 Gene

No data available for Regulatory Elements for SRP14-AS1 Gene

Proteins for SRP14-AS1 Gene

Post-translational modifications for SRP14-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SRP14-AS1 Gene

Domains for SRP14-AS1 Gene

Gene Families for SRP14-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SRP14-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SRP14-AS1 Gene

Function for SRP14-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SRP14-AS1 Gene

Localization for SRP14-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SRP14-AS1 Gene

Pathways for SRP14-AS1 Gene

SuperPathways for SRP14-AS1 Gene

No Data Available

Interacting Proteins for SRP14-AS1 Gene

Gene Ontology (GO) - Biological Process for SRP14-AS1 Gene

None

No data available for Pathways by source for SRP14-AS1 Gene

Transcripts for SRP14-AS1 Gene

mRNA/cDNA for SRP14-AS1 Gene

(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SRP14-AS1 Gene

No ASD Table

Relevant External Links for SRP14-AS1 Gene

GeneLoc Exon Structure for
SRP14-AS1
ECgene alternative splicing isoforms for
SRP14-AS1

Expression for SRP14-AS1 Gene

mRNA expression in normal human tissues for SRP14-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for SRP14-AS1 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (4.0).
genes like me logo Genes that share expressions with SRP14-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for SRP14-AS1 Gene

Orthologs for SRP14-AS1 Gene

Evolution for SRP14-AS1 Gene

ENSEMBL:
Gene Tree for SRP14-AS1 (if available)
TreeFam:
Gene Tree for SRP14-AS1 (if available)

No data available for Orthologs for SRP14-AS1 Gene

Paralogs for SRP14-AS1 Gene

No data available for Paralogs for SRP14-AS1 Gene

Variants for SRP14-AS1 Gene

Sequence variations from dbSNP and Humsavar for SRP14-AS1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs749748 -- 40,057,708(-) agtta(C/G)agaac intron-variant
rs749749 -- 40,057,930(-) CAAAC(A/G)CAAAT intron-variant
rs1010879 -- 40,041,714(-) gtgga(C/T)gctgc intron-variant
rs2412474 -- 40,041,590(+) ccacc(A/G)tctga intron-variant
rs2412475 -- 40,042,375(+) ACAGC(A/G)CTATC intron-variant

Relevant External Links for SRP14-AS1 Gene

HapMap Linkage Disequilibrium report
SRP14-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for SRP14-AS1 Gene

Disorders for SRP14-AS1 Gene

No disorders were found for SRP14-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for SRP14-AS1 Gene

Publications for SRP14-AS1 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3
  2. Common variants near TARDBP and EGR2 are associated with susceptibility to Ewing sarcoma. (PMID: 22327514) Postel-Vinay S. … Delattre O. (Nat. Genet. 2012) 3
  3. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3

Products for SRP14-AS1 Gene

Sources for SRP14-AS1 Gene

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