Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SRGAP3-AS4 Gene

Subcategory (RNA class) for SRGAP3-AS4 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SRGAP3-AS4 Gene

  • SRGAP3 Antisense RNA 4 2 3 5
  • SRGAP3 Antisense RNA 4 (Non-Protein Coding) 2

External Ids for SRGAP3-AS4 Gene

Previous GeneCards Identifiers for SRGAP3-AS4 Gene

  • GC00U933278

Summaries for SRGAP3-AS4 Gene

GeneCards Summary for SRGAP3-AS4 Gene

SRGAP3-AS4 (SRGAP3 Antisense RNA 4) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SRGAP3-AS4 Gene

Genomics for SRGAP3-AS4 Gene

Regulatory Elements for SRGAP3-AS4 Gene

Enhancers for SRGAP3-AS4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F009251 0.6 ENCODE 0.4 -5.5 -5528 0.2 LOC101927440 SRGAP3-AS4
GH03F009279 0.6 ENCODE 0.3 +23.6 23639 1.2 PKNOX1 ESRRA RFX1 ZIC2 OSR2 ZFHX2 ZXDB TRIM28 SRGAP3 SRGAP3-AS1 ENSG00000254485 ENSG00000231401 SRGAP3-AS4 GC03M009298
GH03F009301 0.6 Ensembl ENCODE 0.2 +45.4 45414 1.7 ELF3 BMI1 ZNF2 RAD21 ZNF143 KLF7 ZNF391 FOS CREM KLF13 RAD18 ENSG00000199815 ENSG00000254485 GC03M009298 SRGAP3-AS4
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SRGAP3-AS4 on UCSC Golden Path with GeneCards custom track

Genomic Location for SRGAP3-AS4 Gene

Chromosome:
3
Start:
9,256,759 bp from pter
End:
9,257,507 bp from pter
Size:
749 bases
Orientation:
Plus strand

Genomic View for SRGAP3-AS4 Gene

Genes around SRGAP3-AS4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SRGAP3-AS4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SRGAP3-AS4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SRGAP3-AS4 Gene

Proteins for SRGAP3-AS4 Gene

Post-translational modifications for SRGAP3-AS4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SRGAP3-AS4 Gene

Domains & Families for SRGAP3-AS4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SRGAP3-AS4 Gene

Function for SRGAP3-AS4 Gene

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SRGAP3-AS4 Gene

Localization for SRGAP3-AS4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SRGAP3-AS4 Gene

Pathways & Interactions for SRGAP3-AS4 Gene

SuperPathways for SRGAP3-AS4 Gene

No Data Available

Interacting Proteins for SRGAP3-AS4 Gene

Gene Ontology (GO) - Biological Process for SRGAP3-AS4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SRGAP3-AS4 Gene

Transcripts for SRGAP3-AS4 Gene

mRNA/cDNA for SRGAP3-AS4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SRGAP3-AS4 Gene

No ASD Table

Relevant External Links for SRGAP3-AS4 Gene

GeneLoc Exon Structure for
SRGAP3-AS4
ECgene alternative splicing isoforms for
SRGAP3-AS4

Expression for SRGAP3-AS4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SRGAP3-AS4 Gene

mRNA differential expression in normal tissues according to GTEx for SRGAP3-AS4 Gene

This gene is overexpressed in Heart - Left Ventricle (x14.5).

NURSA nuclear receptor signaling pathways regulating expression of SRGAP3-AS4 Gene:

SRGAP3-AS4
genes like me logo Genes that share expression patterns with SRGAP3-AS4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SRGAP3-AS4 Gene

Orthologs for SRGAP3-AS4 Gene

Evolution for SRGAP3-AS4 Gene

ENSEMBL:
Gene Tree for SRGAP3-AS4 (if available)
TreeFam:
Gene Tree for SRGAP3-AS4 (if available)

No data available for Orthologs for SRGAP3-AS4 Gene

Paralogs for SRGAP3-AS4 Gene

No data available for Paralogs for SRGAP3-AS4 Gene

Variants for SRGAP3-AS4 Gene

Relevant External Links for SRGAP3-AS4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SRGAP3-AS4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SRGAP3-AS4 Gene

Disorders for SRGAP3-AS4 Gene

No disorders were found for SRGAP3-AS4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SRGAP3-AS4 Gene

Publications for SRGAP3-AS4 Gene

No publications were found for SRGAP3-AS4 Gene.

Products for SRGAP3-AS4 Gene

Sources for SRGAP3-AS4 Gene

Content
Loading form....