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Aliases for SRGAP3-AS3 Gene

Subcategory (RNA class) for SRGAP3-AS3 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SRGAP3-AS3 Gene

  • SRGAP3 Antisense RNA 3 2 3 5
  • SRGAP3 Antisense RNA 3 (Non-Protein Coding) 2

External Ids for SRGAP3-AS3 Gene

Previous GeneCards Identifiers for SRGAP3-AS3 Gene

  • GC03P009260

Summaries for SRGAP3-AS3 Gene

GeneCards Summary for SRGAP3-AS3 Gene

SRGAP3-AS3 (SRGAP3 Antisense RNA 3) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for SRGAP3-AS3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SRGAP3-AS3 Gene

Genomics for SRGAP3-AS3 Gene

GeneHancer (GH) Regulatory Elements for SRGAP3-AS3 Gene

Promoters and enhancers for SRGAP3-AS3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I009213 Enhancer 0.8 ENCODE dbSUPER 550.8 -1.9 -1924 1.9 ZSCAN4 INSM2 ZFP37 MZF1 FEZF1 ZEB2 JUND PRDM6 ZNF366 POLR2A SRGAP3-AS3 BRK1 SRGAP3-AS2 SRGAP3
GH03I009216 Enhancer 0.4 ENCODE dbSUPER 550.8 +0.1 57 0.2 SRGAP3-AS3 GC03P009233 SRGAP3
GH03I009203 Enhancer 1 ENCODE dbSUPER 0.4 -12.4 -12396 1.3 ELF3 FOXA2 ARID4B RAD21 ZNF48 RARA RCOR1 MIXL1 HMG20B SP5 SRGAP3-AS2 SRGAP3-AS3 SRGAP3
GH03I009230 Enhancer 0.4 ENCODE dbSUPER 0.4 +14.6 14556 1.1 GC03P009233 SRGAP3-AS3 SRGAP3
GH03I009229 Enhancer 0.4 ENCODE 0.4 +12.4 12417 0.2 GATA3 VEZF1 GC03P009233 SRGAP3-AS3 SRGAP3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SRGAP3-AS3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SRGAP3-AS3 Gene

Genomic Locations for SRGAP3-AS3 Gene
chr3:9,216,895-9,219,508
(GRCh38/hg38)
Size:
2,614 bases
Orientation:
Plus strand
chr3:9,258,579-9,260,213
(GRCh37/hg19)

Genomic View for SRGAP3-AS3 Gene

Genes around SRGAP3-AS3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SRGAP3-AS3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SRGAP3-AS3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SRGAP3-AS3 Gene

Proteins for SRGAP3-AS3 Gene

Post-translational modifications for SRGAP3-AS3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SRGAP3-AS3 Gene

Domains & Families for SRGAP3-AS3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SRGAP3-AS3 Gene

Function for SRGAP3-AS3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SRGAP3-AS3 Gene

Localization for SRGAP3-AS3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SRGAP3-AS3 Gene

Pathways & Interactions for SRGAP3-AS3 Gene

SuperPathways for SRGAP3-AS3 Gene

No Data Available

Interacting Proteins for SRGAP3-AS3 Gene

Gene Ontology (GO) - Biological Process for SRGAP3-AS3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SRGAP3-AS3 Gene

Drugs & Compounds for SRGAP3-AS3 Gene

No Compound Related Data Available

Transcripts for SRGAP3-AS3 Gene

mRNA/cDNA for SRGAP3-AS3 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SRGAP3-AS3 Gene

SRGAP3 antisense RNA 3:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SRGAP3-AS3 Gene

No ASD Table

Relevant External Links for SRGAP3-AS3 Gene

GeneLoc Exon Structure for
SRGAP3-AS3
ECgene alternative splicing isoforms for
SRGAP3-AS3

Expression for SRGAP3-AS3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SRGAP3-AS3 Gene

mRNA differential expression in normal tissues according to GTEx for SRGAP3-AS3 Gene

This gene is overexpressed in Testis (x46.7).

SOURCE GeneReport for Unigene cluster for SRGAP3-AS3 Gene:

Hs.694646
genes like me logo Genes that share expression patterns with SRGAP3-AS3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SRGAP3-AS3 Gene

Orthologs for SRGAP3-AS3 Gene

Evolution for SRGAP3-AS3 Gene

ENSEMBL:
Gene Tree for SRGAP3-AS3 (if available)
TreeFam:
Gene Tree for SRGAP3-AS3 (if available)

No data available for Orthologs for SRGAP3-AS3 Gene

Paralogs for SRGAP3-AS3 Gene

No data available for Paralogs for SRGAP3-AS3 Gene

Variants for SRGAP3-AS3 Gene

Sequence variations from dbSNP and Humsavar for SRGAP3-AS3 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000438791 -- 9,215,569(+) T/A upstream_transcript_variant
rs1000489627 -- 9,215,250(+) A/T upstream_transcript_variant
rs1000711434 -- 9,216,725(+) G/C upstream_transcript_variant
rs1000807052 -- 9,215,246(+) G/A upstream_transcript_variant
rs1002723524 -- 9,217,242(+) C/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for SRGAP3-AS3 Gene

Variant ID Type Subtype PubMed ID
nsv3690 CNV insertion 18451855

Additional Variant Information for SRGAP3-AS3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SRGAP3-AS3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SRGAP3-AS3 Gene

Disorders for SRGAP3-AS3 Gene

Additional Disease Information for SRGAP3-AS3

No disorders were found for SRGAP3-AS3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SRGAP3-AS3 Gene

Publications for SRGAP3-AS3 Gene

No publications were found for SRGAP3-AS3 Gene.

Products for SRGAP3-AS3 Gene

Sources for SRGAP3-AS3 Gene

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