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Aliases for SRGAP3-AS1 Gene

Subcategory (RNA class) for SRGAP3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SRGAP3-AS1 Gene

  • SRGAP3 Antisense RNA 1 2 3 5
  • SRGAP3 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SRGAP3-AS1 Gene

Previous GeneCards Identifiers for SRGAP3-AS1 Gene

  • GC00U933886

Summaries for SRGAP3-AS1 Gene

GeneCards Summary for SRGAP3-AS1 Gene

SRGAP3-AS1 (SRGAP3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for SRGAP3-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SRGAP3-AS1 Gene

Genomics for SRGAP3-AS1 Gene

Regulatory Elements for SRGAP3-AS1 Gene

Enhancers for SRGAP3-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H009394 1.4 ENCODE dbSUPER 31.1 +384.9 384869 9 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC MEF2D GLIS1 BRPF1 RAD18 SETD5 TTLL3 SRGAP3-AS3 FANCD2 SRGAP3-AS1 THUMPD3-AS1 EMC3-AS1 JAGN1
GH03H009730 1.2 ENCODE 31.1 +717.9 717911 3 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B YY1 SETD5 BRPF1 SRGAP3-AS3 THUMPD3-AS1 CYCSP10 RAD18 SRGAP3-AS1 ENSG00000269982 ENSG00000269886 EMC3-AS1
GH03H009768 1 ENCODE 31.1 +755.6 755618 3 HDGF ATF1 SIN3A ZNF121 GLIS2 ATF7 SP3 YY2 REST ZNF610 SRGAP3-AS3 SRGAP3-AS1 ATP2B2-IT1 ENSG00000230599 BRK1 PRRT3 TTLL3 RPUSD3 CAMK1 OGG1
GH03H008987 0.9 Ensembl ENCODE 11.1 -26.2 -26203 1 SMARCA5 CTCF TFAP4 ZNF654 MAX TRIM22 ELF1 REST ZNF2 RAD21 RAD18 SRGAP3-AS1 SRGAP3
GH03H009279 0.7 ENCODE 10 +266.3 266275 1 PKNOX1 ESRRA RFX1 BMI1 ZIC2 OSR2 ZFHX2 PRDM6 GATA3 POLR2A SRGAP3 SRGAP3-AS1 ENSG00000254485 ENSG00000231401 GC03M009298 SRGAP3-AS4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SRGAP3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SRGAP3-AS1 Gene

Chromosome:
3
Start:
9,014,123 bp from pter
End:
9,015,979 bp from pter
Size:
1,857 bases
Orientation:
Plus strand

Genomic View for SRGAP3-AS1 Gene

Genes around SRGAP3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SRGAP3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SRGAP3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SRGAP3-AS1 Gene

Proteins for SRGAP3-AS1 Gene

Post-translational modifications for SRGAP3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SRGAP3-AS1 Gene

Domains & Families for SRGAP3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SRGAP3-AS1 Gene

Function for SRGAP3-AS1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SRGAP3-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SRGAP3-AS1 Gene

Localization for SRGAP3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SRGAP3-AS1 Gene

Pathways & Interactions for SRGAP3-AS1 Gene

SuperPathways for SRGAP3-AS1 Gene

No Data Available

Interacting Proteins for SRGAP3-AS1 Gene

Gene Ontology (GO) - Biological Process for SRGAP3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SRGAP3-AS1 Gene

Drugs & Compounds for SRGAP3-AS1 Gene

No Compound Related Data Available

Transcripts for SRGAP3-AS1 Gene

mRNA/cDNA for SRGAP3-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SRGAP3-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for SRGAP3-AS1 Gene

No ASD Table

Relevant External Links for SRGAP3-AS1 Gene

GeneLoc Exon Structure for
SRGAP3-AS1
ECgene alternative splicing isoforms for
SRGAP3-AS1

Expression for SRGAP3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SRGAP3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for SRGAP3-AS1 Gene

This gene is overexpressed in Testis (x30.2), Brain - Cerebellum (x5.8), and Brain - Spinal cord (cervical c-1) (x4.7).
genes like me logo Genes that share expression patterns with SRGAP3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SRGAP3-AS1 Gene

Orthologs for SRGAP3-AS1 Gene

Evolution for SRGAP3-AS1 Gene

ENSEMBL:
Gene Tree for SRGAP3-AS1 (if available)
TreeFam:
Gene Tree for SRGAP3-AS1 (if available)

No data available for Orthologs for SRGAP3-AS1 Gene

Paralogs for SRGAP3-AS1 Gene

No data available for Paralogs for SRGAP3-AS1 Gene

Variants for SRGAP3-AS1 Gene

Relevant External Links for SRGAP3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SRGAP3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SRGAP3-AS1 Gene

Disorders for SRGAP3-AS1 Gene

No disorders were found for SRGAP3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SRGAP3-AS1 Gene

Publications for SRGAP3-AS1 Gene

No publications were found for SRGAP3-AS1 Gene.

Products for SRGAP3-AS1 Gene

Sources for SRGAP3-AS1 Gene

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