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Aliases for SRGAP2-AS1 Gene

Subcategory (RNA class) for SRGAP2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SRGAP2-AS1 Gene

  • SRGAP2 Antisense RNA 1 2 3 5
  • SRGAP2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SRGAP2-AS1 Gene

Previous GeneCards Identifiers for SRGAP2-AS1 Gene

  • GC01M206553

Summaries for SRGAP2-AS1 Gene

GeneCards Summary for SRGAP2-AS1 Gene

SRGAP2-AS1 (SRGAP2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SRGAP2-AS1 Gene

Genomics for SRGAP2-AS1 Gene

Genomic Location for SRGAP2-AS1 Gene

Chromosome:
1
Start:
121,360,156 bp from pter
End:
121,398,806 bp from pter
Size:
38,651 bases
Orientation:
Minus strand

Genomic View for SRGAP2-AS1 Gene

Genes around SRGAP2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SRGAP2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SRGAP2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SRGAP2-AS1 Gene

No data available for Regulatory Elements for SRGAP2-AS1 Gene

Proteins for SRGAP2-AS1 Gene

Post-translational modifications for SRGAP2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SRGAP2-AS1 Gene

Domains & Families for SRGAP2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SRGAP2-AS1 Gene

Function for SRGAP2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SRGAP2-AS1 Gene

Localization for SRGAP2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SRGAP2-AS1 Gene

Pathways & Interactions for SRGAP2-AS1 Gene

SuperPathways for SRGAP2-AS1 Gene

No Data Available

Interacting Proteins for SRGAP2-AS1 Gene

Gene Ontology (GO) - Biological Process for SRGAP2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SRGAP2-AS1 Gene

Drugs & Compounds for SRGAP2-AS1 Gene

No Compound Related Data Available

Transcripts for SRGAP2-AS1 Gene

mRNA/cDNA for SRGAP2-AS1 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SRGAP2-AS1 Gene

SRGAP2 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SRGAP2-AS1 Gene

No ASD Table

Relevant External Links for SRGAP2-AS1 Gene

GeneLoc Exon Structure for
SRGAP2-AS1
ECgene alternative splicing isoforms for
SRGAP2-AS1

Expression for SRGAP2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SRGAP2-AS1 Gene

SOURCE GeneReport for Unigene cluster for SRGAP2-AS1 Gene:

Hs.568525
genes like me logo Genes that share expression patterns with SRGAP2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SRGAP2-AS1 Gene

Orthologs for SRGAP2-AS1 Gene

Evolution for SRGAP2-AS1 Gene

ENSEMBL:
Gene Tree for SRGAP2-AS1 (if available)
TreeFam:
Gene Tree for SRGAP2-AS1 (if available)

No data available for Orthologs for SRGAP2-AS1 Gene

Paralogs for SRGAP2-AS1 Gene

No data available for Paralogs for SRGAP2-AS1 Gene

Variants for SRGAP2-AS1 Gene

Sequence variations from dbSNP and Humsavar for SRGAP2-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs10218538 -- 121,399,711(-) ATGGC(C/T)GATGC intron-variant, upstream-variant-2KB
rs10218539 -- 121,399,693(-) CTTTC(C/T)TTCAC intron-variant, upstream-variant-2KB
rs10218803 -- 121,399,676(-) ATCTT(G/T)CAGAA intron-variant, upstream-variant-2KB
rs10218804 -- 121,399,623(-) GGCCC(A/G)GGCCT intron-variant, upstream-variant-2KB
rs111412736 -- 121,366,939(+) GCTTT(-/A/AAA)AAAAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SRGAP2-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv156n106 CNV duplication 24896259
dgv40e214 CNV gain 21293372
dgv62n16 CNV deletion 17901297
esv26760 CNV gain 19812545
esv2720394 CNV deletion 23290073
esv28381 CNV gain+loss 19812545
esv6195 CNV loss 19470904
nsv10076 CNV gain 18304495
nsv1075373 CNV duplication 25765185
nsv1077879 CNV duplication 25765185
nsv10783 CNV loss 18304495
nsv1138806 CNV deletion 24896259
nsv1146068 CNV duplication 26484159
nsv471592 CNV loss 15918152
nsv506959 OTHER sequence alteration 20534489
nsv524681 CNV gain 19592680
nsv7947 CNV loss 18304495
nsv820880 CNV duplication 20802225
nsv824342 CNV gain 20364138
nsv831248 CNV loss 17160897
nsv945593 CNV duplication 23825009
nsv945594 CNV duplication 23825009
nsv946200 CNV duplication 23825009
nsv946201 CNV duplication 23825009
nsv946202 CNV duplication 23825009
nsv946222 CNV duplication 23825009
nsv950869 CNV duplication 24416366
nsv951414 CNV duplication 24416366
nsv954692 CNV deletion 24416366
nsv956694 CNV deletion 24416366

Relevant External Links for SRGAP2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SRGAP2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SRGAP2-AS1 Gene

Disorders for SRGAP2-AS1 Gene

Relevant External Links for SRGAP2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SRGAP2-AS1

No disorders were found for SRGAP2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SRGAP2-AS1 Gene

Publications for SRGAP2-AS1 Gene

No publications were found for SRGAP2-AS1 Gene.

Products for SRGAP2-AS1 Gene

Sources for SRGAP2-AS1 Gene

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