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SRC Gene

protein-coding   GIFtS: 72

GC20P035406
v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)
(Previous name: v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog )
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
(Previous symbol: SRC1)
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
About This Section

Aliases
ASV 1, 2, 5
EC 2.7.10.2 3
OTTHUMP00000174476 2
OTTHUMP00000174477 2
SRC1 2, 3, 5
c-SRC 2
c-Src 3
c-src 1
p60-Src 2, 3
pp60c-src 3
Descriptions
proto-oncogene tyrosine-protein kinase SRC 2
protooncogene SRC, Rous sarcoma 2
tyrosine kinase pp60c-src 2
tyrosine-protein kinase SRC-1 2
v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene
homolog 1
v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog
(avian) 2
External Ids
HGNC: 112831
Entrez Gene: 67142
UniProtKB: P129313
Ensembl: ENSG000001971227
Search outside databases for aliases for SRC gene

Previous GC identifers: GC20P035740 GC20P036650 GC20P036696 GC20P036658

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for SRC:
This gene is highly similar to the v-src gene of Rous sarcoma virus. This proto-oncogene may play a
role in the regulation of embryonic development and cell growth. The protein encoded by this gene
is a tyrosine-protein kinase whose activity can be inhibited by phosphorylation by c-SRC kinase.
Mutations in this gene could be involved in the malignant progression of colon cancer. Two
transcript variants encoding the same protein have been found for this gene. [provided by RefSeq]

Gene Wiki entry for SRC (Src)
(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the SRC gene  

Entrez Gene cytogenetic band: 20q12-q13   Ensembl cytogenetic band:  20q11.23   HGNC cytogenetic band: 20q12-q13

SRC Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 20         GeneLoc Exon Structure

GeneLoc location for GC20P035406:     (about GC identifiers)

Start:
35,406,502 bp from pter
End:
35,467,867 bp from pter
Size:
61,366 bases
Orientation:
plus strand
RefSeq DNA sequence:
NC_000020.9  NT_011362.9  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
About This Section

UniProtKB/Swiss-Prot: SRC_HUMAN, P12931 (See protein sequence)
Recommended Name: Proto-oncogene tyrosine-protein kinase Src  
Size: 536 amino acids; 59835 Da
Subunit: Interacts with DDEF1/ASAP1; via the SH3 domain. Interacts with CCPG1 (By similarity).
Interacts with CDCP1, PELP1, TGFB1I1 and TOM1L2. Interacts with the cytoplasmic domain of MUC1,
phosphorylates it and increases binding of MUC1 with beta-catenin. Interacts with RALGPS1; via the
SH3 domain. Interacts with HEV ORF3 protein; via the SH3 domain
PDB structures from and Proteopedia :
1A07 (3D)    1A08 (3D)    1A09 (3D)    1A1A (3D)    1A1B (3D)    1A1C (3D)    1A1E (3D)    1FMK (3D)    
1HCS (3D)    1HCT (3D)    1KSW (3D)    1O41 (3D)    1O42 (3D)    1O43 (3D)    1O44 (3D)    1O45 (3D)    
1O46 (3D)    1O47 (3D)    1O48 (3D)    1O49 (3D)    1O4A (3D)    1O4B (3D)    1O4C (3D)    1O4D (3D)    
1O4E (3D)    1O4F (3D)    1O4G (3D)    1O4H (3D)    1O4I (3D)    1O4J (3D)    1O4K (3D)    1O4L (3D)    
1O4M (3D)    1O4N (3D)    1O4O (3D)    1O4P (3D)    1O4Q (3D)    1O4R (3D)    1SHD (3D)    1Y57 (3D)    
1YI6 (3D)    1YOJ (3D)    1YOL (3D)    1YOM (3D)    2BDF (3D)    2BDJ (3D)    2H8H (3D)    2SRC (3D)    
Secondary accessions: Q86VB9 Q9H5A8
Alternative splicing: 2 isoforms:  P12931-1   P12931-2   

Post-translational modifications:

  • Phosphorylated on Tyr-530 by c-Src kinase (CSK). The phosphorylated form is termed pp60c-src. The
    phosphorylated tail interacts with the SH2 domain thereby repressing kinase activity1
  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins (2 alternative transcripts): 
    NP_005408.1  NP_938033.1  


    ENSEMBL proteins: 
    ENSP00000353950 ENSP00000362668 ENSP00000362659 ENSP00000362680 ENSP00000350941 


    Human Recombinant Proteins 
    Invitrogen human recombinant proteins for SRC
    Millipore Purified and/or Recombinant SRC Protein
    Sigma-Aldrich Proteins for SRC  
    R&D Systems Recombinant & Natural Proteins for SRC
    Enzo Life Sciences proteins for SRC
    Recombinant Proteins from Abcam (Src, SRC Family Negative Regulatory Phosphorylation Site)
    Human Recombinant Proteins from Abnova (SRC)
                    Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

    3 Gene Ontology (GO) cellular component terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005829 cytosol EXP10858437 11124251
    GO:0005886 plasma membrane IEA--
    GO:0005901 caveola IDA17848177
    About this table

    Antibodies for SRC: 
    Invitrogen Antibodies for SRC
    Millipore Mono- and Polyclonal Antibodies for the study of SRC
    Sigma-Aldrich Antibodies for SRC
    R&D Systems Antibodies for SRC
    Cell Signaling Technology (CST) Antibodies for SRC 
    Antibodies from Abcam (Src, SRC Family Negative Regulatory Phosphorylation Site), each with their AbpromiseSM
    Monoclonal and Polyclonal Antibodies from Abnova (SRC)
    Novus Biologicals Antibodies for SRC

    Assays for SRC: 
    Invitrogen Assays for SRC
    Millipore Kits and Assays for the Analysis of SRC
    R&D Systems ELISAs for SRC         (see all)
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    5/6 InterPro domains/families (see all 6 ):
     IPR017441 Protein_kinase_ATP_BS
     IPR001245 Tyr_pkinase
     IPR000980 SH2
     IPR001452 SH3_domain
     IPR000719 Prot_kinase_core


       GeneDecks  SRC for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry P12931

    ProtoNet protein and cluster: P12931

    3 Blocks protein families:
    IPB000980 SH2 domain signature
    IPB001452 SH3 domain signature
    IPB008266 Tyrosine protein kinase


    UniProtKB/Swiss-Prot: SRC_HUMAN, P12931
    Similarity: Belongs to the protein kinase superfamily. Tyr protein kinase family. SRC subfamily
    Similarity: Contains 1 protein kinase domain
    Similarity: Contains 1 SH2 domain
    Similarity: Contains 1 SH3 domain

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (SRC)
    Millipore RNAi Products for the Analysis of SRC Gene knock-down
    Abnova Chimera RNAi Products for Gene knock-down (SRC)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3): NM_198291

                  Applied Biosystems Silencer® siRNAs for SRC

                  Sigma-Aldrich siRNA and siRNA Panels for SRC  
                         Sigma-Aldrich shRNA Panels and shRNA for SRC  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Invitrogen Clones for SRC
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_005417
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_005417
                                     untagged cDNA clones in CMV expression vector (see all 3): NM_005417 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_005417

    UniProtKB/Swiss-Prot: SRC_HUMAN, P12931
    Catalytic activity: ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphate
    Enzyme Number (IUBMB): EC 2.7.10.2 

    Genatlas biochemistry entry for SRC:
    avian sarcoma (Schmidt-Ruppin A-2) viral (v-src) oncogene homolog

    15/16 MGI mutant phenotypes (inferred from 1 allele(MGI details for Src) (see all 16 ):

    behavior/neurologicalcraniofacialgrowth/sizehematopoietic systemimmune system
    lethality-postnatallethality-prenatal/perinatallife span-post-weaning/aginglimbs/digits/tailnervous system
    pigmentationreproductive systemrespiratory systemskeletonskin/coat/nails

    5/7 Gene Ontology (GO) molecular function terms (links to tree view) (see all 7 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000166 nucleotide binding IEA--
    GO:0004715 non-membrane spanning protein tyrosine kinase activity IEA--
    GO:0005070 SH3/SH2 adaptor activity TAS9020193
    GO:0005524 ATP binding IEA--
    GO:0008022 protein C-terminus binding IEA--
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    5/36 Invitrogen iPath™ Online BioAtlas - Pathways for SRC (see all 36 ) (Maps provided by GeneGo):
     PTEN pathway
     Angiotensin signaling via PYK2
     PDGF signaling via STATs and NF-kB
     Focal adhesion complex formation: WASF-proteins and activation of RAP GTP-ase
     The role of amyloid proteins in cell adhesion

       GeneDecks  SRC for the pathways selected above  
    About GeneDecksing

    5/48 Millipore Pathways for SRC (see all 48 )
     Chemotaxis CXCR4 signaling pathway
     Translation Translation regulation by Alpha-1 adrenergic receptors
     Development Activation of ERK by Alpha-1 adrenergic receptors
     Cell adhesion PLAU signaling
     Cytoskeleton remodeling FAK signaling

       GeneDecks  SRC for the pathways selected above  
    About GeneDecksing

    5/34 Sigma-Aldrich "Your Favorite Gene" Pathways for  SRC  (Your Favorite Gene powered by Ingenuity) (see all 34
     14-3-3-mediated Signaling
     Integrin Signaling
     RAR Activation
     Neuregulin Signaling
     Wnt/&beta

       GeneDecks  SRC for the pathways selected above  
    About GeneDecksing

    6 Cell Signaling Technology (CST) Pathways for SRC: 
     Wnt/b-Catenin Signaling
     Jak/Stat Signaling: IL-6 Receptor Family
     Translational Control: Regulation of eIF4E and p70 S6 Kinase
     Cytoskeletal Signaling
     Protein Acetylation
     MAPK/Erk in Growth and Differentiation

       GeneDecks  SRC for the pathways selected above  
    About GeneDecksing

    5/8 Kegg Pathways  (Kegg details for SRC) (see all 8 ):
     hsa04012 ErbB signaling pathway
     hsa04370 VEGF signaling pathway
     hsa04510 Focal adhesion
     hsa04520 Adherens junction
     hsa04530 Tight junction

       GeneDecks  SRC for the pathways selected above  
    About GeneDecksing
     Gene Network CentralTM Interacting Genes and Proteins Network for  SRC 


    5/643 Interacting proteins for SRC (P129311, 2 ENSP000003626593) via UniProtKB, MINT, and/or STRING (see all 643 )
    InteractantInteraction Details
    GeneCardExternal ID(s)
    PTPN1P180312, ENSP000003606833MINT-6797096 MINT-6793501 MINT-6794959 MINT-6795286 MINT-6794163 MINT-6795447 MINT-6764626 MINT-6764915 MINT-6795268 MINT-6795409 MINT-6795229 MINT-6794843 MINT-6794810 MINT-6795255 STRING (score=.999)
    CBLP226812, ENSP000002640333MINT-7040192 MINT-7040213 MINT-7040318 MINT-3982451 MINT-6539730 MINT-7040120 MINT-7040304 STRING (score=.999)
    MLLT4P551962, ENSP000002526923MINT-4950584 MINT-4961227 MINT-4961303 MINT-4961273 MINT-4961253 MINT-4961196 MINT-4961138 STRING (score=.981)
    RPL10P16P276352, ENSP000003588253MINT-7145938 MINT-7145955 MINT-7145972 MINT-7146023 MINT-7145921 MINT-7145994 STRING (score=.96)
    LNX1Q8TBB12, ENSP000002639253MINT-6538383 MINT-6504442 MINT-6504455 MINT-6504479 MINT-6504523 MINT-6504500 STRING (score=.939)
    About this table

    5/19 Gene Ontology (GO) biological process terms (links to tree view) (see all 19 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001101 response to acid IEA--
    GO:0006950 response to stress IEA--
    GO:0007172 signal complex assembly TAS9924018
    GO:0007173 epidermal growth factor receptor signaling pathway IEA--
    GO:0007243 protein kinase cascade TAS9020193
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Enzo Life Sciences drugs & compounds for SRC
    Sigma-Aldrich Small Molecules for SRC:
    Antagonist Inhibitor

    Compounds for SRC available from Tocris Bioscience
    CompoundAction CAS number
    Herbimycin ASrc family kinase inhibitor. Also Hsp90 inhibitor[70563-58-5]
    Lavendustin AEGFR, p60c-src inhibitor[125697-92-9]
    1-Naphthyl PP1Src family kinase inhibitor; also inhibits c-Abl[221243-82-9]
    MNSSelective inhibitor of Src and Syk[1485-00-3]
    About this table


    10/26 Novoseek chemical compound relationships for SRC gene (see all 26 )
    Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    tyrosine 94.69 2639 9096689 (6), 11641791 (6), 9331427 (5), 12869565 (5) (see all 99)
    phosphotyrosine 87.72 146 9337879 (2), 10880360 (2), 16611216 (2), 11493667 (2) (see all 99)
    4-amino-5-(4-chlorophenyl)-7-(t-butyl)pyrazolo[3,4-d]pyrimidine 84.06 15 15618223 (1), 16669788 (1), 19145781 (1), 12739161 (1) (see all 12)
    phosphatidylinositol 80.79 178 1332046 (2), 9565618 (2), 11230874 (2), 7538175 (2) (see all 99)
    cgp77675 75.47 7 11840778 (1), 14521054 (1), 10833396 (1), 15087474 (1) (see all 6)
    phosphoinositide 65.53 55 1311317 (3), 15817454 (2), 15556934 (2), 10880360 (1) (see all 42)
    wortmannin 63.09 24 17299794 (2), 10393094 (1), 11069718 (1), 11267999 (1) (see all 18)
    pd173955 62.78 1 10373450 (1)
    pd 98,059 60.90 16 14570928 (1), 17526768 (1), 10779380 (1), 12925710 (1) (see all 14)
    threonine 59.82 36 7516061 (3), 1379736 (2), 7690037 (2), 12378693 (2) (see all 26)
    About this table

    2 PharmGKB drug compound relationships for SRC gene
    Drug compound PharmGKB Relations PubMed IDs for articles supporting these relationships
    Beta adrenergic antagonistsFA  14499340
    isoproterenolFA  14990578 9363896
    About this table


    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (SRC)
    Millipore RNAi Products for the Analysis of SRC Gene knock-down
    Abnova Chimera RNAi Products for Gene knock-down (SRC)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3): NM_198291

                  Sigma-Aldrich siRNA and siRNA Panels for SRC  
                         Sigma-Aldrich shRNA Panels and shRNA for SRC  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_005417  NM_198291  

    REFSEQ mRNAs for SRC gene (2 alternative transcripts): 

    NM_005417.3   NM_198291.1   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_005417  NM_198291  

                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_005417
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_005417
                                     untagged cDNA clones in CMV expression vector (see all 3): NM_005417 

    Additional cDNA sequence: 

    AF272982.1 AK024281.1 BC011566.1 BC051270.1 Z18364.1 

    11 DOTS entries:

    DT.310679  DT.95082049  DT.75101398  DT.100820136  DT.95118917  DT.91929476  DT.95082051  DT.120827952 
    DT.120827971  DT.75180400  DT.95358075 

    24/131 AceView cDNA sequences (see all 131 ):

    CD365254 NM_198291 BC011566 AW298220 BM761470 CD369263 AK024281 CA502880 
    NM_005417 CD364525 AI282193 BE391008 BM352972 AW135290 BC051270 BQ941942 
    BE467452 CK821940 BF685697 BE388654 BE732984 BE504806 CD742807 BQ924865 

    highest scoring ESTs for SRC:

    AA398992 AA399627 AA402622 AA729487 AA999869 AI536788 AI564897 AK024281 AW275187 AW364235 

    Unigene Cluster for SRC:

    V-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)
    Hs.195659  [show with all ESTs]
    Unigene Representative Sequence: NM_005417


    GeneLoc Exon Structure

    5/8 Alternative Splicing Database (ASD) splice patterns (SP) for SRC (see all 8 )

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b ^ 7a · 7b ^ 8 ^ 9 ^ 10a · 10b ^ 11a · 11b ^ 12a · 12b ^ 13a · 13b ^ 14a · 14b ^ 15
    SP1:              -                             -                             -                                   -     -                 -         
    SP2:                                            -                             -                                   -     -                 -         
    SP3:                                                                                                              -     -                 -         
    SP4:                                                                          -                                                                     
    SP5:              -                                                                                                                                 

    About this scheme

    ECgene alternative splicing isoforms for SRC

    5 Ensembl transcripts including schematic representations:
    ENST00000360723  ENST00000373567  ENST00000373558  ENST00000373578  ENST00000358208  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    SRC expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for SRC

    1 / 2 / 3

    9 probe-sets matching SRC gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

    38904_at2, 3 U95-A 1 1.00 1.00 0.78 0.75 AF077754 0.20 1.00 0.72 1

    1938_at2, 3 U95-A 1 1.00 1.00 0.60 1.26 K03218 0.20 1.00 0.72 1

    213324_at2, 3 U133-A 1 1.00 1.00 -- -- AK024281 0.80 1.00 0.91 1

    221284_s_at2, 3 U133-A 1 1.00 1.00 -- -- NM_005417 0.60 1.00 0.82 1

    1565082_x_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    213324_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    1565080_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    221284_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    1558211_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
    About this table
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: --

    SOURCE GeneReport for Unigene cluster: Hs.195659

    Expression variation in blood from EXPOLDB for SRC

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for SRC gene from 5/11 species (see all 11 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    SRC1   -- v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog more 92.41(n)
    98.88(a)
    485864  XM_542988.2  XP_542988.2 
    chimpanzee
    (Pan troglodytes)
    SRC1   -- v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog more 94.22(n)
    92.54(a)
    458229  XM_001141228.1  XP_001141228.1 
    cow
    (Bos taurus)
    SRC1   -- v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog more 92.79(n)
    98.13(a)
    535742  XM_615852.3  XP_615852.2 
    rat
    (Rattus norvegicus)
    Src1   -- v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog more 89.91(n)
    99.25(a)
    83805  NM_031977.1  NP_114183.1 
    mouse
    (Mus musculus)
    Src1, 5 2 (89.00 cM)5
    Rous sarcoma oncogene1, 5 90.09(n)1
    99.07(a)1
    207791  NM_009271.31  NP_033297.21 
     AJ3122585  AJ3122595  (see all 28)
    About this table        Species with no ortholog for SRC

    ENSEMBL Gene Tree for SRC
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

    Paralogs for SRC gene
    FYN2  FGR2  YES12  

    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
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    10/383 NCBI SNPs in SRC are shown (see all 383 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 129)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr 20 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    rs60179161,2
    A,C,F,H35404692(+) GCTTCA/CACTAG 1 -- ng518Minor allele frequency- C:0.31EU EA WA NA 774
    --
    rs37622031,2
    A,C,F,H35444443(-) tcagcG/Atcctc 2 -- ut51 ese34Minor allele frequency- A:0.17EU EA WA 412
    --
    rs60119871,2
    A,C,F,H35405701(+) GGGGTG/AGTTAA 1 -- ng51 tfbs33Minor allele frequency- A:0.27EU EA 300
    --
    rs72750121,2
    A,C,F35406513(+) AGTGCG/AGCCAT 2 -- ut51 ng51 ese33Minor allele frequency- A:0.17NA 142
    rs60179191,2
    A,F,H35405348(+) ccctcG/Atttta 1 -- ng514Minor allele frequency- A:0.03EU EA WA 412
    --
    rs177854751,2
    C,F35466307(+) TGTCCC/TGTGGC 2 -- ut31 ese33Minor allele frequency- T:0.05NA 138
    rs60179171,2
    C,F35405160(+) TATATA/GCAGTT 1 -- ng51 tfbs33Minor allele frequency- G:0.01NA 142
    rs72733861,2
    F,H35406196(+) GGCTTG/CATTGG 2 -- ng511Minor allele frequency- C:0.03EU 106
    rs60943861,2
    H35407406(+) ACTCAG/AGTCAA 2 -- int1 ng514Minor allele frequency- A:0.00EU EA WA 394
    rs61249571,2
    H35465551(+) GCTCAC/TTGAAC 2 -- ut31 ese34Minor allele frequency- T:0.00EU EA WA 410
    About this table

    HapMap Linkage Disequilibrium images for SRC (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
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    OMIM: 190090

    10/92 Novoseek disease relationships for SRC gene (see all 92 )

    Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    sarcoma rous 57.17 35 7609076 (3), 7853507 (2), 14969582 (1), 16211495 (1) (see all 21)
    tumors 56.72 340 10022129 (5), 10473101 (5), 18556171 (4), 16951177 (4) (see all 99)
    cancer 56.07 225 19307596 (5), 14760089 (4), 15060621 (4), 11114744 (4) (see all 99)
    breast cancer 55.69 214 19383905 (5), 9014858 (5), 11007774 (4), 19372587 (4) (see all 99)
    wiskott-aldrich syndrome 53.64 8 8824280 (3), 8892607 (1), 15673667 (1), 16741966 (1) (see all 6)
    colon cancer 52.55 97 17934522 (5), 9444956 (4), 12939401 (4), 18839319 (4) (see all 45)
    metastasis 45.96 127 7687314 (6), 19383905 (4), 15753384 (4), 9142389 (3) (see all 66)
    x-linked agammaglobulinemia 45.83 2 7519238 (1), 7880320 (1)
    cancer invasiveness 42.22 1 19383905 (1)
    prostate cancer 40.45 53 16894533 (4), 18679417 (4), 16140968 (4), 17426060 (4) (see all 27)
    About this table

    3 PharmGKB disease relationships for SRC gene
    Disease PharmGKB Relations PubMed IDs for articles supporting these relationships
    AsthmaFA  12003786
    Heart Failure, CongestiveFA  14499340
    HypertensionFA  14499340
    About this table

    Human Gene Mutation Database: SRC
    Tumor Gene Database: SRC
    Breast Cancer Gene Database: SRC

    (Possibly Related Articles in Doctor's Guide)
    About This Section

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/2561 PubMed articles for SRC gene (see all 2561 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
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    Entrez Gene: 6714 HGNC: 11283 AceView: SRC Ensembl:ENSG00000197122 euGenes: HUgn6714
    ECgene: SRC H-InvDB: SRC
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

    NameDescription
    ATLAS Chromosomes in Cancer entry for SRC Genetics and Cytogenetics in Oncology and Haematology
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



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      Free SNP selection tool



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     Drugs/Proteins for SRC
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     Antibodies for SRC

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