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Aliases for SPTY2D1-AS1 Gene

Subcategory (RNA class) for SPTY2D1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SPTY2D1-AS1 Gene

  • SPTY2D1 Antisense RNA 1 2 3 5
  • SPTY2D1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SPTY2D1-AS1 Gene

Summaries for SPTY2D1-AS1 Gene

GeneCards Summary for SPTY2D1-AS1 Gene

SPTY2D1-AS1 (SPTY2D1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPTY2D1-AS1 Gene

Genomics for SPTY2D1-AS1 Gene

Genomic Location for SPTY2D1-AS1 Gene

Chromosome:
11
Start:
18,599,787 bp from pter
End:
18,610,255 bp from pter
Size:
10,469 bases
Orientation:
Plus strand

Genomic View for SPTY2D1-AS1 Gene

Genes around SPTY2D1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SPTY2D1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SPTY2D1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPTY2D1-AS1 Gene

No data available for Regulatory Elements for SPTY2D1-AS1 Gene

Proteins for SPTY2D1-AS1 Gene

  • Protein details for SPTY2D1-AS1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0U1RQQ8
    Recommended name:
    Protein SPTY2D1-AS1
    Protein Accession:
    A0A0U1RQQ8

    Protein attributes for SPTY2D1-AS1 Gene

    Size:
    56 amino acids
    Molecular mass:
    6619 Da
    Quaternary structure:
    No Data Available
  • Protein details for SPTY2D1-AS1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0U1RQZ7
    Recommended name:
    Protein SPTY2D1-AS1
    Protein Accession:
    A0A0U1RQZ7

    Protein attributes for SPTY2D1-AS1 Gene

    Size:
    40 amino acids
    Molecular mass:
    4451 Da
    Quaternary structure:
    No Data Available
  • Protein details for SPTY2D1-AS1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0U1RR47
    Recommended name:
    Protein SPTY2D1-AS1
    Protein Accession:
    A0A0U1RR47

    Protein attributes for SPTY2D1-AS1 Gene

    Size:
    76 amino acids
    Molecular mass:
    8821 Da
    Quaternary structure:
    No Data Available
  • Protein details for SPTY2D1-AS1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0U1RRN3
    Recommended name:
    HCG1992263
    Protein Accession:
    A0A0U1RRN3

    Protein attributes for SPTY2D1-AS1 Gene

    Size:
    59 amino acids
    Molecular mass:
    6977 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SPTY2D1-AS1 Gene

Proteomics data for SPTY2D1-AS1 Gene at MOPED

Post-translational modifications for SPTY2D1-AS1 Gene

No Post-translational modifications

Other Protein References for SPTY2D1-AS1 Gene

No data available for DME Specific Peptides for SPTY2D1-AS1 Gene

Domains & Families for SPTY2D1-AS1 Gene

Protein Domains for SPTY2D1-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SPTY2D1-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SPTY2D1-AS1 Gene

Function for SPTY2D1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SPTY2D1-AS1 Gene

Localization for SPTY2D1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SPTY2D1-AS1 Gene

Pathways & Interactions for SPTY2D1-AS1 Gene

SuperPathways for SPTY2D1-AS1 Gene

No Data Available

Interacting Proteins for SPTY2D1-AS1 Gene

Gene Ontology (GO) - Biological Process for SPTY2D1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SPTY2D1-AS1 Gene

Drugs & Compounds for SPTY2D1-AS1 Gene

No Compound Related Data Available

Transcripts for SPTY2D1-AS1 Gene

mRNA/cDNA for SPTY2D1-AS1 Gene

(3) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SPTY2D1-AS1 Gene

SPTY2D1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SPTY2D1-AS1 Gene

No ASD Table

Relevant External Links for SPTY2D1-AS1 Gene

GeneLoc Exon Structure for
SPTY2D1-AS1
ECgene alternative splicing isoforms for
SPTY2D1-AS1

Expression for SPTY2D1-AS1 Gene

mRNA expression in normal human tissues for SPTY2D1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for SPTY2D1-AS1 Gene

This gene is overexpressed in Testis (x17.3).

SOURCE GeneReport for Unigene cluster for SPTY2D1-AS1 Gene Hs.585529

genes like me logo Genes that share expression patterns with SPTY2D1-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SPTY2D1-AS1 Gene

Orthologs for SPTY2D1-AS1 Gene

Evolution for SPTY2D1-AS1 Gene

ENSEMBL:
Gene Tree for SPTY2D1-AS1 (if available)
TreeFam:
Gene Tree for SPTY2D1-AS1 (if available)

No data available for Orthologs for SPTY2D1-AS1 Gene

Paralogs for SPTY2D1-AS1 Gene

No data available for Paralogs for SPTY2D1-AS1 Gene

Variants for SPTY2D1-AS1 Gene

Sequence variations from dbSNP and Humsavar for SPTY2D1-AS1 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs2121387 -- 18,602,742(+) TTAAA(C/T)ATTTT intron-variant
rs2403321 -- 18,605,166(+) ACCCG(A/G)GAGGT intron-variant
rs3074337 -- 18,597,953(+) AAAGC(-/TC)TGTAG upstream-variant-2KB
rs4369382 -- 18,604,063(+) CTGGG(A/G)CTACA intron-variant
rs5790042 -- 18,605,246(+) AAAAG(-/A)AAAAA intron-variant

Relevant External Links for SPTY2D1-AS1 Gene

HapMap Linkage Disequilibrium report
SPTY2D1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SPTY2D1-AS1 Gene

Disorders for SPTY2D1-AS1 Gene

Relevant External Links for SPTY2D1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SPTY2D1-AS1

No disorders were found for SPTY2D1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SPTY2D1-AS1 Gene

Publications for SPTY2D1-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 67

Products for SPTY2D1-AS1 Gene

Sources for SPTY2D1-AS1 Gene

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