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Aliases for SPTLC1P4 Gene

Subcategory (RNA class) for SPTLC1P4 Gene


Aliases for SPTLC1P4 Gene

  • Serine Palmitoyltransferase Long Chain Base Subunit 1 Pseudogene 4 2 3 5

External Ids for SPTLC1P4 Gene

ORGUL Members for SPTLC1P4 Gene

Previous GeneCards Identifiers for SPTLC1P4 Gene

  • GC00U931864

Summaries for SPTLC1P4 Gene

GeneCards Summary for SPTLC1P4 Gene

SPTLC1P4 (Serine Palmitoyltransferase Long Chain Base Subunit 1 Pseudogene 4) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for SPTLC1P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPTLC1P4 Gene

Genomics for SPTLC1P4 Gene

Regulatory Elements for SPTLC1P4 Gene

Enhancers for SPTLC1P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H151940 2 FANTOM5 Ensembl ENCODE dbSUPER 14.7 -133.9 -133855 7.6 PKNOX1 FOXA2 SIN3A FEZF1 ZNF2 ZBTB7B ZNF416 FOS DEK SP3 POGZ GABPB2 PI4KB MRPL9 PIP5K1A LYSMD1 ENSG00000229021 HRNR THEM4 C1orf56
GH01H152052 1.1 ENCODE dbSUPER 0.3 -25.2 -25213 0.2 YBX1 ZNF2 RAD21 RFX5 ZNF766 SCRT2 ZNF143 RCOR1 DEK SMARCA5 SCNM1 PI4KB LOC101927949 SPTLC1P4
GH01H152070 0.8 ENCODE 0.4 -6.5 -6547 0.9 HDAC1 PKNOX1 ATF1 TBL1XR1 ZNF766 GATA2 ATF7 CREM NCOA1 ZNF592 S100A11 TCHH ENSG00000226716 PUDPP2 FLG SPTLC1P4 LOC101927949
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SPTLC1P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SPTLC1P4 Gene

Genomic Locations for SPTLC1P4 Gene
262 bases
Plus strand

Genomic View for SPTLC1P4 Gene

Genes around SPTLC1P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SPTLC1P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SPTLC1P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPTLC1P4 Gene

Proteins for SPTLC1P4 Gene

Post-translational modifications for SPTLC1P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SPTLC1P4 Gene

Domains & Families for SPTLC1P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SPTLC1P4 Gene

Function for SPTLC1P4 Gene

Phenotypes From GWAS Catalog for SPTLC1P4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SPTLC1P4 Gene

Localization for SPTLC1P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SPTLC1P4 Gene

Pathways & Interactions for SPTLC1P4 Gene

SuperPathways for SPTLC1P4 Gene

No Data Available

Interacting Proteins for SPTLC1P4 Gene

Gene Ontology (GO) - Biological Process for SPTLC1P4 Gene


No data available for Pathways by source and SIGNOR curated interactions for SPTLC1P4 Gene

Drugs & Compounds for SPTLC1P4 Gene

No Compound Related Data Available

Transcripts for SPTLC1P4 Gene

mRNA/cDNA for SPTLC1P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SPTLC1P4 Gene

No ASD Table

Relevant External Links for SPTLC1P4 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SPTLC1P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SPTLC1P4 Gene

mRNA differential expression in normal tissues according to GTEx for SPTLC1P4 Gene

This gene is overexpressed in Testis (x45.6).

NURSA nuclear receptor signaling pathways regulating expression of SPTLC1P4 Gene:

genes like me logo Genes that share expression patterns with SPTLC1P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SPTLC1P4 Gene

Orthologs for SPTLC1P4 Gene

Evolution for SPTLC1P4 Gene

Gene Tree for SPTLC1P4 (if available)
Gene Tree for SPTLC1P4 (if available)

No data available for Orthologs for SPTLC1P4 Gene

Paralogs for SPTLC1P4 Gene

No data available for Paralogs for SPTLC1P4 Gene

Variants for SPTLC1P4 Gene

Relevant External Links for SPTLC1P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SPTLC1P4 Gene

Disorders for SPTLC1P4 Gene

No disorders were found for SPTLC1P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SPTLC1P4 Gene

Publications for SPTLC1P4 Gene

No publications were found for SPTLC1P4 Gene.

Products for SPTLC1P4 Gene

Sources for SPTLC1P4 Gene

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