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Aliases for SPRR2C Gene

Aliases for SPRR2C Gene

  • Small Proline-Rich Protein 2C (Pseudogene) 2 3
  • Small Proline-Rich Protein 2C 2

External Ids for SPRR2C Gene

Previous GeneCards Identifiers for SPRR2C Gene

  • GC01M150928
  • GC01M148895
  • GC01M149887
  • GC01M150329
  • GC01M150228
  • GC01M149926
  • GC01U901201
  • GC01M151380
  • GC01M151381
  • GC01M124475

Summaries for SPRR2C Gene

GeneCards Summary for SPRR2C Gene

SPRR2C (Small Proline-Rich Protein 2C (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPRR2C Gene

Genomics for SPRR2C Gene

Regulatory Elements for SPRR2C Gene

Genomic Location for SPRR2C Gene

153,140,118 bp from pter
153,141,493 bp from pter
1,376 bases
Minus strand

Genomic View for SPRR2C Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for SPRR2C Gene

Proteins for SPRR2C Gene

Post-translational modifications for SPRR2C Gene

No Post-translational modifications

No data available for DME Specific Peptides for SPRR2C Gene

Domains & Families for SPRR2C Gene

Suggested Antigen Peptide Sequences for SPRR2C Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for SPRR2C Gene

Function for SPRR2C Gene

Molecular function for SPRR2C Gene

GENATLAS Biochemistry:
small proline rich protein 2C,precursor of cornified cell envelope,cornifin,clustered in the epidermal differentiation complex (EDC)

miRNA for SPRR2C Gene

miRTarBase miRNAs that target SPRR2C

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targets and HOMER Transcription for SPRR2C Gene

Localization for SPRR2C Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SPRR2C Gene

Pathways & Interactions for SPRR2C Gene

SuperPathways for SPRR2C Gene

No Data Available

Interacting Proteins for SPRR2C Gene

Gene Ontology (GO) - Biological Process for SPRR2C Gene


No data available for Pathways by source and SIGNOR curated interactions for SPRR2C Gene

Drugs & Compounds for SPRR2C Gene

No Compound Related Data Available

Transcripts for SPRR2C Gene

mRNA/cDNA for SPRR2C Gene

(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SPRR2C Gene

Small proline-rich protein 2C (pseudogene):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SPRR2C Gene

No ASD Table

Relevant External Links for SPRR2C Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SPRR2C Gene

mRNA expression in normal human tissues for SPRR2C Gene

mRNA differential expression in normal tissues according to GTEx for SPRR2C Gene

This gene is overexpressed in Esophagus - Mucosa (x30.3), Minor Salivary Gland (x9.3), and Testis (x6.4).

SOURCE GeneReport for Unigene cluster for SPRR2C Gene Hs.2421

genes like me logo Genes that share expression patterns with SPRR2C: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SPRR2C Gene

Orthologs for SPRR2C Gene

Evolution for SPRR2C Gene

Gene Tree for SPRR2C (if available)
Gene Tree for SPRR2C (if available)

No data available for Orthologs for SPRR2C Gene

Paralogs for SPRR2C Gene

No data available for Paralogs for SPRR2C Gene

Variants for SPRR2C Gene

Sequence variations from dbSNP and Humsavar for SPRR2C Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs2928 -- 153,140,330(-) CAAAA(G/T)GTTTC nc-transcript-variant
rs541364 -- 153,141,437(-) TGCTT(C/T)GGAGA nc-transcript-variant
rs564211 -- 153,141,601(-) AGATT(A/C)CCTGT upstream-variant-2KB
rs572703 -- 153,142,632(-) gggac(A/G)tatct upstream-variant-2KB
rs1284558 -- 153,142,823(-) cacca(C/T)gatca upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SPRR2C Gene

Variant ID Type Subtype PubMed ID
nsv2921 CNV Insertion 18451855

Relevant External Links for SPRR2C Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SPRR2C Gene

Disorders for SPRR2C Gene

Relevant External Links for SPRR2C

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with SPRR2C: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SPRR2C Gene

Publications for SPRR2C Gene

  1. MicroRNA-196a is a potential marker of progression during Barrett's metaplasia-dysplasia-invasive adenocarcinoma sequence in esophagus. (PMID: 19342367) Maru D.M. … Luthra R. (Am. J. Pathol. 2009) 23 67
  2. Molecular characterization and evolution of the SPRR family of keratinocyte differentiation markers encoding small proline-rich proteins. (PMID: 8325635) Gibbs S. … Backendorf C. (Genomics 1993) 2 67
  3. Isolation, characterization, and UV-stimulated expression of two families of genes encoding polypeptides of related structure in human epidermal keratinocytes. (PMID: 3133554) Kartasova T. … van de Putte P. (Mol. Cell. Biol. 1988) 2 67
  4. A human protein-protein interaction network: a resource for annotating the proteome. (PMID: 16169070) Stelzl U. … Wanker E.E. (Cell 2005) 67
  5. Estrogen regulates the expression of the small proline-rich 2 gene family in the mouse uterus. (PMID: 15232223) Hong S.H. … Kim M.K. (Mol. Cells 2004) 67

Products for SPRR2C Gene

Sources for SPRR2C Gene

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