Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

SPRED1 Gene

protein-coding   GIFtS: 61
GCID: GC15P038545

sprouty-related, EVH1 domain containing 1

 Explore 13 diseases affiliated with
SPRED1 via our new
 Human Malady Compendium 
Biological research products
for SPRED1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Sprouty-Related, EVH1 Domain Containing 11 2     Spred-13
HSpred11     Sprouty-Related, EVH1 Domain-Containing Protein 12
NFLS2 5     Suppressor Of Ras/MAPK Activation2
FLJ339031     Spred-13

External Ids:    HGNC: 202491   Entrez Gene: 1617422   Ensembl: ENSG000001660687   OMIM: 6092915   UniProtKB: Q7Z6993   

Export aliases for SPRED1 gene to outside databases

Previous GC identifers: GC15P031440 GC15P036123 GC15P036260 GC15P036331 GC15P015389


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for SPRED1:
The protein encoded by this gene is a member of the Sprouty family of proteins and is phosphorylated by tyrosine kinase
in response to several growth factors. The encoded protein can act as a homodimer or as a heterodimer with SPRED2 to
regulate activation of the MAP kinase cascade. Defects in this gene are a cause of neurofibromatosis type 1-like
syndrome (NFLS). (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: SPRE1_HUMAN, Q7Z699
Function: Tyrosine kinase substrate that inhibits growth-factor-mediated activation of MAP kinase. Negatively regulates
hematopoiesis of bone marrow (By similarity)

Gene Wiki entry for SPRED1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000015.9  NC_018926.1  NT_010194.17  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the SPRED1 gene promoter:
         TBP   AML1a   FOXF2   MEF-2   POU6F1 (c2)   MEF-2A   POU2F1   POU2F1a   aMEF-2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidSPRED1 promoter sequence
   Search SABiosciences Chromatin IP Primers for SPRED1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SPRED1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 15q14   Ensembl cytogenetic band:  15q14   HGNC cytogenetic band: 15q14

SPRED1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SPRED1 gene location

GeneLoc information about chromosome 15         GeneLoc Exon Structure

GeneLoc location for GC15P038545:  view genomic region     (about GC identifiers)

Start:
38,544,527 bp from pter      End:
38,649,450 bp from pter
Size:
104,924 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: SPRE1_HUMAN, Q7Z699 (See protein sequence)
Recommended Name: Sprouty-related, EVH1 domain-containing protein 1  
Size: 444 amino acids; 50477 Da
Subunit: Interacts with Ras. Interacts with TAOK2 and TESK1 (By similarity). Homodimer and heterodimer. Interacts with
CAV1. Able to interact with SPRED2 to form heterodimers
Subcellular location: Cell membrane; Peripheral membrane protein. Membrane, caveola; Peripheral membrane protein.
Nucleus. Note=Localized in cholesterol-rich membrane raft/caveola fractions
Sequence caution: Sequence=AAH18015.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A
sequence;
1 PDB 3D structure from and Proteopedia for SPRED1:
3SYX (3D)    
Secondary accessions: B2RPJ8 Q05D53 Q8N256

Explore the universe of human proteins at neXtProt for SPRED1: NX_Q7Z699

Post-translational modifications:

  • Phosphorylated on tyrosine (By similarity)1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q7Z699

  • SPRED1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_689807.1  
    ENSEMBL proteins: 
     ENSP00000299084   ENSP00000453680  

    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    OriGene Protein Over-expression Lysate: SPRED1
    OriGene Custom Protein Services for SPRED1 
    GenScript Custom Purified and Recombinant Proteins Services for SPRED1
    Novus Biologicals SPRED1 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for SPRED1

    Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IDA--
    GO:0005730NOT nucleolus IDA--
    GO:0005737cytoplasm IDA--
    GO:0005886plasma membrane IDA--
    GO:0005901caveola IEA--


    SPRED1 for ontologies           About GeneDecksing



    SPRED1 Antibody Products: 
    EMD Millipore Mono- and Polyclonal Antibodies for the study of SPRED1
    R&D Systems Antibodies for SPRED1
    OriGene Antibodies (see all 2): SPRED1
    OriGene Custom Antibody Services for SPRED1 
    GenScript Custom Superior Antibodies Services for SPRED1
    Novus Biologicals SPRED1 Antibodies
    Abcam antibodies for SPRED1 
    Uscn Antibodies for SPRED1
    ThermoFisher Antibodies for SPRED1

    Assay Products for SPRED1: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for SPRED1
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for SPRED1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    SPRED1 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR007875 Sprouty
     IPR011993 PH_like_dom
     IPR000697 EVH1
     IPR023337 KBD

    Graphical View of Domain Structure for InterPro Entry Q7Z699

    ProtoNet protein and cluster: Q7Z699

    1 Blocks protein family: IPB007875 Sprouty

    UniProtKB/Swiss-Prot: SPRE1_HUMAN, Q7Z699
    Similarity: Contains 1 KBD domain
    Similarity: Contains 1 SPR (sprouty) domain
    Similarity: Contains 1 WH1 domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: SPRE1_HUMAN, Q7Z699
    Function: Tyrosine kinase substrate that inhibits growth-factor-mediated activation of MAP kinase. Negatively regulates
    hematopoiesis of bone marrow (By similarity)

    miRNA
    Products:
        
    miRTarBase miRNAs that target SPRED1:
    hsa-mir-126 (MIRT000343)

    OriGene 3'-UTR Clone: SPRED1
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SPRED1
    8/187 QIAGEN miScript miRNA Assays for microRNAs that regulate SPRED1 (see all 187):
    hsa-miR-411* hsa-miR-140-5p hsa-miR-26a-2* hsa-miR-520f hsa-miR-106a hsa-miR-519a hsa-miR-4275 hsa-miR-877*
    SwitchGear 3'UTR luciferase reporter plasmidSPRED1 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SPRED1 (see all 7)
    OriGene shRNA RFP: SPRED1
    OriGene siRNA: SPRED1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SPRED1

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for SPRED1

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SPRED1 (see all 4)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SPRED1
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: SPRED1 (NM_152594)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SPRED1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SPRED1 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for SPRED1
    Search LifeMap BioReagents cell lines for SPRED1

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SPRED1

    Gene Ontology (GO): 5 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005173stem cell factor receptor binding ISS--
    GO:0005515protein binding IPI--
    GO:0019901protein kinase binding IPI--
    GO:0019902phosphatase binding IDA19389623
    GO:0030291protein serine/threonine kinase inhibitor activity ISS--


    SPRED1 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for SPRED1:
     Decreased viability 

    Animal Models:
         Mouse knock-out Spred1tm1Hiin for SPRED1
         8 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Spred1):
     behavior/neurological  craniofacial  growth/size  hematopoietic system  immune system 
     limbs/digits/tail  nervous system  respiratory system 

    SPRED1 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Signaling events mediated by Stem cell factor receptor (c-Kit)
    Signaling events mediated by Stem cell factor receptor (c-Kit)1.00
    Kit Receptor Signaling Pathway0.37
    2Jak-STAT signaling pathway
    Jak-STAT signaling pathway1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    2 BioSystems Pathways for SPRED1 
        Kit Receptor Signaling Pathway
    Signaling events mediated by Stem cell factor receptor (c-Kit)


    1         Kegg Pathway  (Kegg details for SPRED1):
        Jak-STAT signaling pathway


    SPRED1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for SPRED1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 7)

    5/14 Interacting proteins for SPRED1 (Q7Z6991, 2, 3 ENSP000002990844) via UniProtKB, MINT, STRING, and/or I2D (see all 14)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    PPP1CAP621361, 2, 3, ENSP000003260314EBI-5235340,EBI-2623163 MINT-62190 I2D: score=3 STRING: ENSP00000326031
    TTC19Q6DKK22, 3, ENSP000002616474MINT-8275677 I2D: score=2 STRING: ENSP00000261647
    CDKN1AP389362, 3MINT-8252257 I2D: score=2 
    DNAJB11Q9UBS42, 3MINT-8254298 I2D: score=2 
    FAM118BQ9BPY32, 3MINT-8255233 I2D: score=2 
    About this table

    Gene Ontology (GO): 5/7 biological process terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000188inactivation of MAPK activity ISS--
    GO:0007275multicellular organismal development IEA--
    GO:0010801negative regulation of peptidyl-threonine phosphorylation IMP--
    GO:0010923negative regulation of phosphatase activity IDA19389623
    GO:0043517positive regulation of DNA damage response, signal transduction by p53 class mediator ISS--


    SPRED1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for SPRED1
    Search CenterWatch for drugs/clinical trials and news about SPRED1 / SPRE1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for SPRED1 gene: 
    NM_152594.2  

    Unigene Cluster for SPRED1:

    Sprouty-related, EVH1 domain containing 1
    Hs.525781  [show with all ESTs]
    Unigene Representative Sequence: NM_152594
    3 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000299084(uc001zka.4) ENST00000561205 ENST00000561317

    miRNA
    Products:
         
    OriGene 3'-UTR Clone: SPRED1
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SPRED1
    8/187 QIAGEN miScript miRNA Assays for microRNAs that regulate SPRED1 (see all 187):
    hsa-miR-411* hsa-miR-140-5p hsa-miR-26a-2* hsa-miR-520f hsa-miR-106a hsa-miR-519a hsa-miR-4275 hsa-miR-877*
    SwitchGear 3'UTR luciferase reporter plasmidSPRED1 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SPRED1 (see all 7)
    OriGene shRNA RFP: SPRED1
    OriGene siRNA: SPRED1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SPRED1
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SPRED1 (see all 4)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SPRED1
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: SPRED1 (NM_152594)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SPRED1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SPRED1 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SPRED1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat SPRED1
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SPRED1
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SPRED1

    Additional cDNA sequence: 

    AK091222.1 AK095219.1 AL833561.1 AY299089.1 BC018015.1 BC137480.1 BC137481.1 BX538234.1 

    8 DOTS entries:

    DT.40106859  DT.91901809  DT.91874375  DT.100780094  DT.97778989  DT.75150117  DT.95179405  DT.91799898 

    24/112 AceView cDNA sequences (see all 112):

    AA970844 BE502726 BF512854 AA678672 AK095219 BM264115 AI392710 AW269789 
    BF592872 CK824662 BU753010 BC018015 AA565605 AL119827 BQ961421 BG548770 
    AI270700 AW612605 AI742347 BM837523 BM263824 N67355 AI889730 BQ026104 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    SPRED1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: --

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See SPRED1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for SPRED1

    SOURCE GeneReport for Unigene cluster: Hs.525781

    UniProtKB/Swiss-Prot: SPRE1_HUMAN, Q7Z699
    Tissue specificity: Weakly expressed in embryonic cell line HEK293

        SABiosciences Expression via Pathway-Focused PCR Array including SPRED1: 
              Inflammatory Response & Autoimmunity 384HT in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SPRED1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat SPRED1
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SPRED1
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SPRED1
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SPRED1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for SPRED1 gene from 6/22 species (see all 22)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves SPRED11 sprouty-related, EVH1 domain containing 1 83.09(n)
    84.63(a)
      423292  NM_001199709.1  NP_001186638.1 
    lizard
    (Anolis carolinensis)
    Reptilia SPRED16
    --
    74(a)
    1 ↔ 1
    1(32584838-32606759)
    tropical clawed frog
    (Xenopus tropicalis)
    Amphibia CF264274.12   -- 75.62(n)    CF264274.1 
    zebrafish
    (Danio rerio)
    Actinopterygii spred11 sprouty-related, EVH1 domain containing 1 62.21(n)
    63.75(a)
      406513  NM_213232.1  NP_998397.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Spred1 Sprouty-related protein with EVH-1 domain 52.56(n)
    48.72(a)
      36643  NM_137144.3  NP_610988.1 
    worm
    (Caenorhabditis elegans)
    Secernentea unc-346
    UNCoordinated family member (unc-34)
    10(a)
    1 → many
    V(982535-995405)


    ENSEMBL Gene Tree for SPRED1 (if available)
    TreeFam Gene Tree for SPRED1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for SPRED1 gene
    SPRED32  SPRED22  
    3 SIMAP similar genes for SPRED1 using alignment to 3 protein entries:     SPRE1_HUMAN (see all proteins):
    SPRED2    EVL    SPRED3

    SPRED1 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1812 NCBI SNPs in SPRED1 are shown (see all 1812    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 15 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs71824451,2
    C,F,A,H,non-pathogenic38614525(+) GACAAA/GAAGTT 2 K syn1 ese332Minor allele frequency- G:0.19NA NS EA WA CSA EU 8275
    rs37515261,2
    C,F,H,non-pathogenic38643574(-) CCCCTG/AACATT 2 /V syn133Minor allele frequency- A:0.20EA NA NS WA CSA EU 9934
    rs791969671,2
    --15387978(+) GCTGCA/GCCAGA 1 -- us2k10--------
    rs745933671,2
    F,--15388297(+) TCATGC/GCAGTT 1 -- us2k11Minor allele frequency- G:0.07WA 118
    rs556452461,2
    --15392053(+) GGGCAG/CGGCGA 1 -- int12Minor allele frequency- C:0.03NA 122
    rs20564981,2
    C,F,H,--15392390(+) CATGGA/CTTTTA 1 -- int19Minor allele frequency- C:0.06NS EA NA WA 680
    rs20564991,2
    C,F,H,--15392678(+) TGACTG/ATGAGA 1 -- int14Minor allele frequency- A:0.01NS EA 418
    rs20565001,2
    C,F,H,--15392836(+) TAAACA/GTACTC 1 -- int16Minor allele frequency- G:0.06NS EA WA 540
    rs9557771,2
    F,H,--15393426(+) tatgtA/Gtatgt 1 -- int14Minor allele frequency- G:0.01NS EA 402
    rs1126366041,2
    --15393623(+) ACTTGC/ATTCAA 1 -- int11Minor allele frequency- A:0.50CSA 2

    HapMap Linkage Disequilibrium report for SPRED1 (38544527 - 38649450 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 2 variations for SPRED1
         1 CNV: 5777
         1 Indel: 60173
    Human Gene Mutation Database (HGMD): SPRED1

    Locus Specific Mutation Databases (LSDB): SPRED1

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SPRED1
    DNA2.0 Custom Variant and Variant Library Synthesis for SPRED1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    SPRED1 for disorders           About GeneDecksing

    OMIM gene information: 609291   
    OMIM disorders: 611431  
    UniProtKB/Swiss-Prot: SPRE1_HUMAN, Q7Z699
  • Defects in SPRED1 are the cause of neurofibromatosis type 1-like syndrome (NFLS) [MIM:611431]. It is a
  • disorder characterized mainly by cafe au lait macules without neurofibromas or other tumor manifestations of
    neurofibromatosis type 1, axillary freckling, and macrocephaly. Additional clinical manifestations include Noonan-like
    facial dysmorphism, lipomas, learning disabilities and attention deficit-hyperactivity

    13 diseases for SPRED1:    About MalaCards
    neurofibromatosis    optic disk drusen    juvenile myelomonocytic leukemia    legius syndrome
    learning disability    myelomonocytic leukemia    noonan syndrome    lipoma
    hematopoiesis    hepatocellular carcinoma    leukemia    carcinoma
    neuronitis

    2 diseases from the University of Copenhagen DISEASES database for SPRED1:
    Neurofibromatosis     Optic disk drusen
    Human Genome Epidemiology (HuGE) Navigator: SPRED1 (5 documents)

    Export disorders for SPRED1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for SPRED1 gene, integrated from 9 sources (see all 40):
    (articles sorted by number of sources associating them with SPRED1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. The Sprouty-related protein, Spred-1, localizes in a lipid raft/caveola and inhibits ERK activation in collaboration with caveolin-1. (PubMed id 16115197)1, 2, 9 Nonami A.... Yoshimura A. (2005)
    2. SPRED1 mutations (Legius syndrome): another clinicall y useful genotype for dissecting the neurofibromatosis type 1 phenotype. (PubMed id 19443465)1, 2 Spurlock G....Upadhyaya M. (2009)
    3. Germline loss-of-function mutations in SPRED1 cause a neurofibromatosis 1-like phenotype. (PubMed id 17704776)1, 2 Brems H.... Legius E. (2007)
    4. Distinct requirements for the Sprouty domain for functional activity of Spred proteins. (PubMed id 15683364)1, 2 King J.A.J.... Hovens C.M. (2005)
    5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    6. Clinical and mutational spectrum of neurofibromatosis type 1-like syndrome. (PubMed id 19920235)1, 9 Messiaen L....Legius E. (2009)
    7. Spred-2 steady-state levels are regulated by phosphorylation and Cbl-mediated ubiquitination. (PubMed id 17094949)1, 9 Lock P....Stylli S.S. (2006)
    8. A shared molecular mechanism underlies the human rasop athies Legius syndrome and Neurofibromatosis-1. (PubMed id 22751498)1 Stowe I.B....McCormick F. (2012)
    9. Protein phosphatase 1a interacting proteins in the hum an brain. (PubMed id 22321011)1 Esteves S.L....da Cruz e Silva E.F. (2012)
    10. Sprouty2 and Spred1-2 proteins inhibit the activation of the ERK pathway elicited by cyclopentenone prostanoids. (PubMed id 21364986)1 GarcA-a-DomA-nguez C.A....Rojas J.M. (2011)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 161742 HGNC: 20249 AceView: SPRED1 Ensembl:ENSG00000166068 euGenes: HUgn161742
    ECgene: SPRED1 Kegg: 161742 H-InvDB: SPRED1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for SPRED1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for SPRED1 gene:
    Search GeneIP for patents involving SPRED1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     Browse Small Molecules at EMD Millipore
     Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
     EMD Millipore Mono- and Polyclonal Antibodies for the study of SPRED1
     Browse for Gene Knock-down Tools from EMD Millipore
     Browse Purified and Recombinant Proteins at EMD Millipore
     Browse Kits and Assays available from EMD Millipore
     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Antibodies for SPRED1 (SPRED1)   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     OriGene Antibodies for SPRED1   OriGene shRNA RFP for SPRED1  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SPRED1   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SPRED1  
     OriGene Protein Over-expression Lysate for SPRED1   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for SPRED1   OriGene 3'-UTR Clone for SPRED1  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SPRED1   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SPRED1  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for SPRED1   OriGene Custom Protein Services for SPRED1  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat SPRED1
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SPRED1
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SPRED1
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SPRED1
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SPRED1
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SPRED1
     GenScript Custom Purified and Recombinant Proteins Services for SPRED1 GenScript cDNA clones with any tag delivered in your preferred vector for SPRED1
     GenScript Custom Assay Services for SPRED1 GenScript Custom Superior Antibodies Services for SPRED1
     GenScript Custom overexpressing Cell Line Services for SPRED1 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in SPRED1 promoter
     Search Chromatin IP Primers for SPRED1
     RT2 qPCR Primer Assay in human, mouse, rat SPRED1
     GNC Network for SPRED1
     SABiosciences PCR Arrays including human, mouse, rat SPRED1
     Search Tocris compounds for SPRED1
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     SPRED1 antibodies
     SPRED1 lysates
     Antibodies for SPRED1
     See all of Abcam's Antibodies, Kits and Proteins for SPRED1
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     SPRED1 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for SPRED1
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SPRED1
     SwitchGear 3'UTR luciferase reporter plasmids for SPRED1
     SwitchGear Promoter luciferase reporter plasmids for SPRED1
     ThermoFisher Antibodies for SPRED1
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SPRED1
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      SPRED1 gene at Home site.
    hostname: 356980-web2.xennexinc.com index build: 100 solr: 1.4