SPP1 Gene
protein-coding GIFtS : 73
GCID: GC04 P088896
secreted phosphoprotein 1 (Previous names: osteopontin, bone sialoprotein I ) (Previous symbols: BNSP, OPN )
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Aliasesfor SPP1 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Secreted Phosphoprotein 1 1 2 3 Nephropontin3 OPN1 2 3 5 Osteopontin/Immunoglobulin Alpha 1 Heavy Chain Constant Region Fusion Protein2 BNSP1 2 3 Secreted Phosphoprotein 1 (Osteopontin, Bone Sialoprotein I, Early T-LymphocyteActivation 1)2 BSPI1 2 SPP1/CALPHA1 Fusion2 ETA-11 2 Uropontin3 Osteopontin1 Nephropontin3 Urinary Stone Protein2 3 SPP-13 Bone Sialoprotein I1 Uropontin3 Early T-Lymphocyte Activation 12 Bone Sialoprotein 13
Export aliases for SPP1 gene to outside databases Previous GC identifers: GC04P089054 GC04P089198 GC04P089355 GC04P089253 GC04P089115 GC04P084643
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Summariesfor SPP1 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for SPP1 : The protein encoded by this gene is involved in the attachment of osteoclasts to the mineralized bone matrix. The encoded protein is secreted and binds hydroxyapatite with high affinity. The osteoclast vitronectin receptor is found in the cell membrane and may be involved in the binding to this protein. This protein is also a cytokine that upregulates expression of interferon-gamma and interleukin-12. Several transcript variants encoding different isoforms have been found for this gene. (provided by RefSeq, Oct 2011) UniProtKB/Swiss-Prot: OSTP_HUMAN, P10451 Function : Binds tightly to hydroxyapatite. Appears to form an integral part of the mineralized matrix. Probablyimportant to cell-matrix interaction Function : Acts as a cytokine involved in enhancing production of interferon-gamma and interleukin-12 and reducingproduction of interleukin-10 and is essential in the pathway that leads to type I immunity (By similarity) Gene Wiki entry for SPP1 (Osteopontin)
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Genomic Viewsfor SPP1 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000004.11 NC_018915.1 NT_016354.19 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the SPP1 gene promoter: AML1a Other transcription factors Search SABiosciences Chromatin IP Primers for SPP1 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SPP1
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 4q22.1 Ensembl cytogenetic band: 4q22.1 HGNC cytogenetic band: 4q22.1 SPP1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 4 GeneLoc Exon Structure
GeneLoc location for GC04P088896: view genomic region
(about GC identifiers )
Start:
88,896,802 bp from pter
End:
88,904,563 bp from pter
Size:
7,762 bases
Orientation:
plus strand
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Proteinsfor SPP1 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: OSTP_HUMAN, P10451 (See
protein sequence )Recommended Name: Osteopontin precursor Size : 314 amino acids; 35423 Da
Subunit : Ligand for integrin alpha-V/beta-3
Subcellular location : Secreted
2 PDB 3D structures from and Proteopedia for SPP1 :3CXD (3D)
  3DSF (3D)
 
Secondary accessions : B2RDA1 Q15681 Q15682 Q15683 Q4W597 Q567T5 Q8NBK2 Q96IZ1Alternative splicing : 5 isoforms : P10451-1 P10451-2 P10451-3 P10451-4 P10451-5 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for SPP1: NX_P10451 Post-translational modifications:
Extensively phosphorylated by FAM20C in the extracellular medium at multiple sites within the S-x-E/pS motif1
N- and O-glycosylated. Isoform 5 is GalNAc O-glycosylated at Thr-59 or Ser-621
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P10451 SPP1 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (5 alternative transcripts):
NP_000573.1 NP_001035147.1 NP_001035149.1 NP_001238758.1 NP_001238759.1 ENSEMBL proteins: ENSP00000237623 ENSP00000378517 ENSP00000354042 ENSP00000422973 Reactome Protein details: P10451 Human Recombinant Protein Products: Gene Ontology (GO): 5/7 cellular component terms (GO ID links to tree view) (see all 7 ): About this table
SPP1 for ontologies About GeneDecksing SPP1 Antibody Products: Assay Products for SPP1:
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Protein
Domains / Familiesfor SPP1 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
SPP1 for domains About GeneDecksing 2 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry P10451 ProtoNet protein and cluster: P10451
1 Blocks protein family : IPB002038 Osteopontin UniProtKB/Swiss-Prot: OSTP_HUMAN, P10451 Similarity : Belongs to the osteopontin family
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Functionfor SPP1 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: OSTP_HUMAN, P10451 Function : Binds tightly to hydroxyapatite. Appears to form an integral part of the mineralized matrix. Probablyimportant to cell-matrix interaction Function : Acts as a cytokine involved in enhancing production of interferon-gamma and interleukin-12 and reducingproduction of interleukin-10 and is essential in the pathway that leads to type I immunity (By similarity)
Genatlas biochemistry entry for SPP1 : secreted phosphoprotein 1 (osteopontin),regulated by CBFA1 and ETS1 in the skeletal tissue Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for SPP1 (see all 5 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for SPP1 (see all 5 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 3 ): SPP1 (NM_001040058 ) Sino Biological Human cDNA Clone for SPP1 DNA2.0 Custom Codon Optimized Gene
Synthesis Service for SPP1 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat SPP1
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SPP1
Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005125 cytokine activity
IEA -- GO:0050840 extracellular matrix binding
IEA --
SPP1 for ontologies About GeneDecksing 2 GenomeRNAi human phenotypes for SPP1 :Animal Models: Mouse knock-outs for SPP1: Spp1 tm1Blh Spp1 tm1Rit 15/17 MGI mutant phenotypes (inferred from 4 alleles ) (MGI details for Spp1) (see all 17 ):
SPP1 for phenotypes About GeneDecksing
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Pathways & Interactionsfor SPP1 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/20 super-pathways (see all 20 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Integrin Pathway 2 Rho Family GTPases 3 Transcription_Role of VDR in regulation of genes involved in osteoporosis 4 Development_Hedgehog and PTH signaling pathways in bone and cartilage development 5 PTEN Pathway
Pathway sources See GeneCards unified pathways Show all pathways 2 EMD Millipore Pathways for SPP1 5/15 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for SPP1 (see all 15 )2 GeneGo (Thomson Reuters) Pathways for SPP1 5/10 BioSystems Pathways for SPP1 (see all 10 ) 3
Reactome Pathways for SPP1 3
Kegg Pathways (Kegg details for SPP1) :
SPP1 for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for SPP1 STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/47 Interacting proteins for SPP1 (P10451 2 , 3 ENSP00000378517 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 47 )About this table Gene Ontology (GO): 5/15 biological process terms (GO ID links to tree view) (see all 15 ): About this table
SPP1 for ontologies About GeneDecksing
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Drugs & Compoundsfor SPP1 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
SPP1 for compounds About GeneDecksing Browse Tocris compounds for SPP1 10/110 Novoseek chemical compound relationships for SPP1 gene (see all 110 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
calcium oxalate
78.9
137
19581305 (5), 10461108 (5), 12706004 (4), 16104927 (4) (see all 44 )
grgds
76.3
42
7522656 (6), 8972713 (4), 1421573 (2), 11787071 (1) (see all 17 )
alizarin
75.8
6
15165454 (1), 15271969 (1), 20413153 (1), 15956138 (1) (see all 6 )
hydroxyapatite
74.7
143
16007483 (9), 8010953 (4), 7615968 (4), 16011845 (4) (see all 58 )
1,25 dihydroxy vitamin d3
60.5
12
10404392 (1), 11834737 (1), 7571189 (1), 8900396 (1) (see all 12 )
lm 609
60.4
2
10726209 (1), 7522656 (1)
nimorazole
59.5
2
16198981 (2)
calcium
52.6
169
16145474 (4), 10460892 (4), 7988430 (4), 20144595 (3) (see all 91 )
titanium
52
14
20155835 (2), 18983324 (2), 17437306 (2), 11173803 (1) (see all 6 )
vitamin d
50
43
19246678 (2), 7708050 (1), 9556070 (1), 1665202 (1) (see all 28 )
Search CenterWatch for drugs/clinical trials and news about SPP1 / OSTP
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Transcriptsfor SPP1 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for SPP1 gene (5 alternative transcripts): NM_000582.2 NM_001040058.1 NM_001040060.1 NM_001251829.1 NM_001251830.1 Unigene Cluster for SPP1:
Secreted phosphoprotein 1 Hs.313 [show with all ESTs ] Unigene Representative Sequence: NM_001251830 10 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000237623 (uc003hra.3 uc003hrb.3 uc003hrc.3 uc003hrd.3 )ENST00000395080 ENST00000360804 ENST00000504310 ENST00000513981 ENST00000509334 ENST00000508233 ENST00000509659 (uc011cde.2 ) ENST00000508002 ENST00000505146 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for SPP1 (see all 5 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for SPP1 (see all 5 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 3 ): SPP1 (NM_001040058 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for SPP1 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat SPP1
Additional cDNA sequence: AB019562.1 AB209987.1 AB469789.1 AF052124.1 AK057738.1 AK075463.1 AK290090.1 AK290104.1 AK295491.1 AK296035.1 AK315461.1 AY956318.1 BC007016.1 BC017387.1 BC022844.1 BC093033.1 BX648003.1 D28759.1 D28760.1 D28761.1 DQ839491.1 DQ846870.1 DQ846871.1 HQ874460.1 HQ874461.1 J04765.1 M83248.1 X13694.1
24/50 DOTS entries (see all 50 ): DT.100889418 DT.99982600
DT.95324972 DT.92471676 DT.100889364 DT.454110 DT.91739764 DT.91690113 DT.92471713 DT.92410290 DT.121247185 DT.100889395 DT.100889393 DT.100889376 DT.95299295 DT.435134 DT.100889441 DT.95311246 DT.100889421 DT.92471710 DT.121247173 DT.121247212 DT.121247266 DT.100889380 24/1338 AceView cDNA sequences (see all 1338 ):
BI491007 BU164427 BG167131 BQ775873 AI924770 CA428029 CR610632 BG164584 AL542581 CB139553 BC007016 CA412415 BQ639810 BU736483 AF052124 BQ340439 BU158575 CR610609 CR618080 CA413769 BG142252 CR621889 BU617661 AA911756 GeneLoc Exon Structure 5/6 Alternative Splicing Database (ASD) splice patterns (SP) for SPP1 (see all 6 ) About this scheme ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b ^ 7 ^ 8a · 8b · 8c ^ 9a · 9b SP1 :         -   -       -               SP2 :         -   -       -               SP3 :           -       -               SP4 :                 -               SP5 :         -   -                    
ECgene alternative splicing isoforms for SPP1
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Expression for SPP1 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section SPP1 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: AATAGAAATT
About this image SPP1 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table 10/80 LifeMap In Vivo Development Anatomical Compartments/Cells (see all 80 ) Tissue Anatomical Compartment
Cell Category (developmental path) Bone Autopod Growth Plate Hypertrophic Chondrocytes Bone, Cartilage Bone Autopod Growth Plate Terminal Chondrocytes Bone, Cartilage Bone Autopod Periosteum Endochondral Osteoblasts Bone Bone Autopod Periosteum Endochondral Osteocytes Bone Bone Autopod Periosteum Immature Endochondral Osteoblasts Bone Bone Caudal Endochondral Bones Endochondral Osteoblasts Bone Bone Caudal Endochondral Bones Endochondral Osteocytes Bone Bone Caudal Endochondral Bones Hypertrophic Chondrocytes Bone, Cartilage Bone Caudal Endochondral Bones Terminal Chondrocytes Bone, Cartilage Bone Cervical Vertebrae Endochondral Osteocytes Bone Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
Stem Cell Differentiation: 10/27 LifeMap Cells (see all 27 ) Name Category PureStem™ mesenchymal Progenitor SK11 (Embryonic Progenitor Cell)Adipose, Bone, Cartilage PureStem™ mesenchymal progenitor 7SMOO32 (Embryonic Progenitor Cell)Adipose, Bone, Cartilage PureStem™ endothelial progenitor 30-SM2-1 (Embryonic Progenitor Cell)Endothelium PureStem™ epithelial progenitor E164 (Embryonic Progenitor Cell)Intermediate Mesoderm, Kidney PureStem™ progenitor EN2 (Embryonic Progenitor Cell)PureStem™ progenitor SK17 (Embryonic Progenitor Cell)PureStem™ progenitor SM22 (Embryonic Progenitor Cell)CyT49 (Embryonic Stem Cell)Early Embryo, Inner Cell Mass Line H7 (WA07) (Embryonic Stem Cell)Early Embryo, Inner Cell Mass Line H9 (WA09) (Embryonic Stem Cell)Early Embryo, Inner Cell Mass
See SPP1 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for SPP1 SOURCE GeneReport for Unigene cluster: Hs.313 UniProtKB/Swiss-Prot: OSTP_HUMAN, P10451 Tissue specificity : Bone. Found in plasma SABiosciences Expression via Pathway-Focused PCR Arrays including SPP1 (see all 18 ): Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for SPP1Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat SPP1 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat SPP1 Search QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SPP1 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SPP1
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Orthologsfor SPP1 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for SPP1 gene from 3/8 species (see all 8 ) About this table
ENSEMBL Gene Tree for SPP1 (if available)TreeFam Gene Tree for SPP1 (if available)
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Paralogsfor SPP1 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section --
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Genomic Variantsfor SPP1 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 1 variation for SPP1 1 Inversion : 37256 Human Gene Mutation Database (HGMD) : SPP1 SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing SPP1
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Disorders
/ Diseasesfor SPP1 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
SPP1 for disorders About GeneDecksing
OMIM gene information: 166490
OMIM disorders : --20/232 diseases for SPP1 (see all 232 ): About MalaCards vogt-koyanagi-harada disease open-angle glaucoma atypical teratoid rhabdoid tumor relapsing-remitting multiple sclerosis calcific tendinitis pigmented villonodular synovitis dentinogenesis imperfecta villonodular synovitis dentin dysplasia primary open angle glaucoma dentin dysplasia, type ii osteofibrous dysplasia neuromyelitis optica central nervous system lymphoma periventricular leukomalacia autoimmune lymphoproliferative syndrome lichen planus allergic contact dermatitis coronary restenosis contact dermatitis 6 diseases from the University of Copenhagen DISEASES database for SPP1 :Cancer Kidney disease Osteoporosis Atherosclerosis Calcinosis Heart disease 10/98 Novoseek disease relationships for SPP1 gene (see all 98 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
calcification
77.6
339
10766759 (10), 15041047 (7), 19902145 (6), 15820201 (6) (see all 99 )
metastasis
64.3
485
16831281 (6), 11315992 (6), 18972404 (5), 9637769 (4) (see all 99 )
dentinogenesis imperfecta
63.3
2
9541230 (1), 7665163 (1)
renal stone
62.9
44
8619372 (5), 8761944 (4), 7571189 (3), 7735136 (3) (see all 17 )
urinary stones
59.8
59
8325891 (4), 10929424 (4), 9365840 (3), 1575754 (2) (see all 25 )
dentin dysplasia
58.1
1
9541230 (1)
osteosarcoma
56.5
28
12404059 (5), 17022822 (4), 14975209 (2), 14994076 (2) (see all 13 )
tumors
54.6
841
9761120 (9), 8080043 (8), 15355566 (7), 20377868 (7) (see all 99 )
lymphatic metastasis
49.3
13
16880782 (2), 17148500 (2), 16816376 (2), 17181739 (1) (see all 6 )
pleural malignant mesothelioma
48.9
14
17493236 (2), 19528482 (2), 17504993 (2), 16221779 (2) (see all 8 )
Genetic Association Database (GAD): SPP1 Human Genome Epidemiology (HuGE) Navigator: SPP1 (56 documents) Export disorders for SPP1 gene to outside databases
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Publicationsfor SPP1 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for SPP1 gene, integrated from 9 sources (see all 1938 ): (articles sorted by number of sources associating them with SPP1) Utopia : connect your pdf to the dynamic world of online information
Molecular cloning and sequencing of cDNA encoding urinary stone protein, which is identical to osteopontin. (PubMed id 1575754) 1 , 2 , 3, 9 Kohri K.... Kurita T. (1992) Overexpression of osteopontin in rheumatoid synovial mononuclear cells is associated with joint inflammation, not with genetic polymorphism. (PubMed id 15742430) 1 , 4, 9 Xu G....Zhang J. (2005) Expression of osteopontin in human glioma. Its correlation with the malignancy. (PubMed id 7837791) 1 , 2 , 9 Saitoh Y.... Ushio Y. (1995) A polymorphism of the osteopontin gene is related to urinary calcium stones. (PubMed id 16145474) 1 , 4, 9 Gao B....Kohri K. (2005) Matrix Gla protein and osteopontin genetic associations with coronary artery calcification and bone density: the CARDIA study. (PubMed id 15744522) 1 , 4, 9 Taylor B.C....Sidney S. (2005) Osteopontin polymorphisms and disease course in multiple sclerosis. (PubMed id 12761568) 1 , 4, 9 Caillier S....Oksenberg J.R. (2003) Genetic polymorphisms of osteopontin in association with multiple sclerosis in Japanese patients. (PubMed id 12620651) 1 , 4, 9 Niino M....Tashiro K. (2003) Inhibition of calcium oxalate crystal growth in vitro by uropontin: another member of the aspartic acid-rich protein superfamily. (PubMed id 1729712) 1 , 2 , 9 Shiraga H.... Hoyer J.R. (1992) Osteopontin gene polymorphisms in Spanish patients with rheumatoid arthritis. (PubMed id 15742429) 1 , 4, 9 Urcelay E....de la Concha E. (2005) Two single-nucleotide polymorphisms in the 5' and 3' ends of the osteopontin gene contribute to susceptibility to systemic lupus erythematosus. (PubMed id 15692970) 1 , 4, 9 D'Alfonso S....Momigliano-Richiardi P. (2005)
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External Searches for SPP1 gene
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OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing SPP1 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
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Other Databases showing SPP1 gene
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Specialized Databases showing SPP1 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for SPP1 gene: Search GeneIP for patents involving SPP1 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor SPP1 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for SPP1 OriGene shRNA RFP for SPP1 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for SPP1 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for SPP1 OriGene Protein Over-expression Lysate for SPP1 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for SPP1 OriGene 3'-UTR Clone for SPP1 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for SPP1 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for SPP1 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for SPP1 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
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QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat SPP1 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing SPP1 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SPP1 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat SPP1 Search QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SPP1 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat SPP1
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Recombinant Protein for SPP1
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Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SPP1
ThermoFisher Antibodies for SPP1
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat SPP1
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