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Aliases for SPIN4-AS1 Gene

Subcategory (RNA class) for SPIN4-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SPIN4-AS1 Gene

  • SPIN4 Antisense RNA 1 2 3 5
  • SPIN4 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SPIN4-AS1 Gene

Previous GeneCards Identifiers for SPIN4-AS1 Gene

  • GC00U933411
  • GC0XP062570

Summaries for SPIN4-AS1 Gene

GeneCards Summary for SPIN4-AS1 Gene

SPIN4-AS1 (SPIN4 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPIN4-AS1 Gene

Genomics for SPIN4-AS1 Gene

Regulatory Elements for SPIN4-AS1 Gene

Enhancers for SPIN4-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF063350 0.9 ENCODE 0.8 +1.4 1407 1.9 ELF3 TBP HDAC1 CBX3 PKNOX1 MLX ZNF48 RAD21 GLIS2 GATA2 SPIN4 SPIN4-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SPIN4-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for SPIN4-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001490138 655 3399 ELF3 TBP HDAC1 CBX3 PKNOX1 MLX FEZF1 ZNF48 RAD21 GLIS2

Genomic Location for SPIN4-AS1 Gene

Chromosome:
X
Start:
63,349,646 bp from pter
End:
63,352,178 bp from pter
Size:
2,533 bases
Orientation:
Plus strand

Genomic View for SPIN4-AS1 Gene

Genes around SPIN4-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SPIN4-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SPIN4-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SPIN4-AS1 Gene

Proteins for SPIN4-AS1 Gene

Post-translational modifications for SPIN4-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SPIN4-AS1 Gene

Domains & Families for SPIN4-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SPIN4-AS1 Gene

Function for SPIN4-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SPIN4-AS1 Gene

Localization for SPIN4-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SPIN4-AS1 Gene

Pathways & Interactions for SPIN4-AS1 Gene

SuperPathways for SPIN4-AS1 Gene

No Data Available

Interacting Proteins for SPIN4-AS1 Gene

Gene Ontology (GO) - Biological Process for SPIN4-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SPIN4-AS1 Gene

Transcripts for SPIN4-AS1 Gene

mRNA/cDNA for SPIN4-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SPIN4-AS1 Gene

No ASD Table

Relevant External Links for SPIN4-AS1 Gene

GeneLoc Exon Structure for
SPIN4-AS1
ECgene alternative splicing isoforms for
SPIN4-AS1

Expression for SPIN4-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SPIN4-AS1 Gene

genes like me logo Genes that share expression patterns with SPIN4-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SPIN4-AS1 Gene

Orthologs for SPIN4-AS1 Gene

Evolution for SPIN4-AS1 Gene

ENSEMBL:
Gene Tree for SPIN4-AS1 (if available)
TreeFam:
Gene Tree for SPIN4-AS1 (if available)

No data available for Orthologs for SPIN4-AS1 Gene

Paralogs for SPIN4-AS1 Gene

No data available for Paralogs for SPIN4-AS1 Gene

Variants for SPIN4-AS1 Gene

Relevant External Links for SPIN4-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SPIN4-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SPIN4-AS1 Gene

Disorders for SPIN4-AS1 Gene

No disorders were found for SPIN4-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SPIN4-AS1 Gene

Publications for SPIN4-AS1 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington J.J. … Ducar M. (Nat. Biotechnol. 2001) 3 64

Products for SPIN4-AS1 Gene

Sources for SPIN4-AS1 Gene

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