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Aliases for SPDYE8P Gene

Aliases for SPDYE8P Gene

  • Speedy/RINGO Cell Cycle Regulator Family Member E8, Pseudogene 2 3
  • Speedy Homolog E8 (Xenopus Laevis), Pseudogene 2

External Ids for SPDYE8P Gene

Previous GeneCards Identifiers for SPDYE8P Gene

  • GC07M072131
  • GC07M072491
  • GC07M071824

Summaries for SPDYE8P Gene

GeneCards Summary for SPDYE8P Gene

SPDYE8P (Speedy/RINGO Cell Cycle Regulator Family Member E8, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPDYE8P Gene

Genomics for SPDYE8P Gene

Regulatory Elements for SPDYE8P Gene

Genomic Location for SPDYE8P Gene

Start:
73,019,731 bp from pter
End:
73,029,766 bp from pter
Size:
10,036 bases
Orientation:
Minus strand

Genomic View for SPDYE8P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SPDYE8P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPDYE8P Gene

Proteins for SPDYE8P Gene

Post-translational modifications for SPDYE8P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SPDYE8P Gene

Domains for SPDYE8P Gene

Gene Families for SPDYE8P Gene

HGNC:
  • SPDY :Speedy homologs

Suggested Antigen Peptide Sequences for SPDYE8P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SPDYE8P: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SPDYE8P Gene

Function for SPDYE8P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SPDYE8P Gene

Localization for SPDYE8P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SPDYE8P Gene

Pathways for SPDYE8P Gene

SuperPathways for SPDYE8P Gene

No Data Available

Interacting Proteins for SPDYE8P Gene

Gene Ontology (GO) - Biological Process for SPDYE8P Gene

None

No data available for Pathways by source for SPDYE8P Gene

Transcripts for SPDYE8P Gene

mRNA/cDNA for SPDYE8P Gene

(2) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SPDYE8P Gene

No ASD Table

Relevant External Links for SPDYE8P Gene

GeneLoc Exon Structure for
SPDYE8P
ECgene alternative splicing isoforms for
SPDYE8P

Expression for SPDYE8P Gene

mRNA expression in normal human tissues for SPDYE8P Gene

genes like me logo Genes that share expressions with SPDYE8P: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for SPDYE8P Gene

Orthologs for SPDYE8P Gene

Evolution for SPDYE8P Gene

ENSEMBL:
Gene Tree for SPDYE8P (if available)
TreeFam:
Gene Tree for SPDYE8P (if available)

No data available for Orthologs for SPDYE8P Gene

Paralogs for SPDYE8P Gene

No data available for Paralogs for SPDYE8P Gene

Variants for SPDYE8P Gene

Sequence variations from dbSNP and Humsavar for SPDYE8P Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs439305 -- 73,029,869(+) CTCCT(A/G)GTTAA upstream-variant-2KB
rs1183843 -- 73,031,366(+) agttt(C/T)gctct upstream-variant-2KB
rs17147101 -- 73,027,908(-) AGAGC(A/G)GAGCC nc-transcript-variant
rs28742901 -- 73,029,513(+) CGGGG(A/G)CAGCA intron-variant
rs55681826 -- 73,029,259(+) AAAAA(A/T)TTTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SPDYE8P Gene

Variant ID Type Subtype PubMed ID
dgv2095e1 CNV Complex 17122850
nsv520573 CNV Gain+Loss 19592680
esv34349 CNV Gain 17911159
dgv2098e1 CNV Complex 17122850
nsv428171 CNV Gain 18775914
dgv2099e1 CNV Complex 17122850
nsv888362 CNV Gain 21882294
nsv469664 CNV Loss 16826518
nsv831025 CNV Loss 17160897
esv2734660 CNV Deletion 23290073
esv26856 CNV Gain 19812545
nsv821246 CNV Deletion 20802225
nsv8135 CNV Gain+Loss 18304495
dgv2100e1 CNV Complex 17122850
nsv888381 CNV Gain 21882294
nsv528969 CNV Gain 19592680
dgv2101e1 CNV Complex 17122850
dgv2102e1 CNV Complex 17122850
essv14753 CNV CNV 17122850
nsv821387 CNV Deletion 20802225
esv25179 CNV Gain 19812545
nsv8154 CNV Gain+Loss 18304495
nsv831035 CNV Loss 17160897

Relevant External Links for SPDYE8P Gene

HapMap Linkage Disequilibrium report
SPDYE8P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SPDYE8P Gene

Disorders for SPDYE8P Gene

No disorders were found for SPDYE8P Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for SPDYE8P Gene

Publications for SPDYE8P Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for SPDYE8P Gene

Sources for SPDYE8P Gene

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