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Aliases for SPDYE7P Gene

Aliases for SPDYE7P Gene

  • Speedy/RINGO Cell Cycle Regulator Family Member E7, Pseudogene 2 3 5
  • Speedy Homolog E7 (Xenopus Laevis), Pseudogene 2
  • Speedy Protein E7 Pseudogene 4

External Ids for SPDYE7P Gene

Previous GeneCards Identifiers for SPDYE7P Gene

  • GC07M071973
  • GC07M072334

Summaries for SPDYE7P Gene

GeneCards Summary for SPDYE7P Gene

SPDYE7P (Speedy/RINGO Cell Cycle Regulator Family Member E7, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPDYE7P Gene

Genomics for SPDYE7P Gene

Regulatory Elements for SPDYE7P Gene

Enhancers for SPDYE7P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F073736 1.8 FANTOM5 Ensembl ENCODE 16.2 -870.2 -870215 7.8 HDGF PKNOX1 CREB3L1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 SLC30A9 WBSCR27 ABHD11-AS1 SPDYE7P WBSCR22 FKBP6 LOC100101148 POM121B MIR590 ABHD11 CLDN4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SPDYE7P on UCSC Golden Path with GeneCards custom track

Genomic Location for SPDYE7P Gene

Chromosome:
7
Start:
72,862,757 bp from pter
End:
72,870,510 bp from pter
Size:
7,754 bases
Orientation:
Minus strand

Genomic View for SPDYE7P Gene

Genes around SPDYE7P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SPDYE7P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SPDYE7P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPDYE7P Gene

Proteins for SPDYE7P Gene

  • Protein details for SPDYE7P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q495Y7-SPDE7_HUMAN
    Recommended name:
    Putative speedy protein E7
    Protein Accession:
    Q495Y7

    Protein attributes for SPDYE7P Gene

    Size:
    208 amino acids
    Molecular mass:
    25253 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SPDYE7P Gene

Post-translational modifications for SPDYE7P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SPDYE7P Gene

Domains & Families for SPDYE7P Gene

Gene Families for SPDYE7P Gene

Protein Domains for SPDYE7P Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for SPDYE7P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q495Y7

UniProtKB/Swiss-Prot:

SPDE7_HUMAN :
  • Belongs to the Speedy/Ringo family.
Family:
  • Belongs to the Speedy/Ringo family.
genes like me logo Genes that share domains with SPDYE7P: view

Function for SPDYE7P Gene

Gene Ontology (GO) - Molecular Function for SPDYE7P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0019901 protein kinase binding IBA --
genes like me logo Genes that share ontologies with SPDYE7P: view

Phenotypes for SPDYE7P Gene

GenomeRNAi human phenotypes for SPDYE7P:
genes like me logo Genes that share phenotypes with SPDYE7P: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SPDYE7P Gene

Localization for SPDYE7P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SPDYE7P Gene

Pathways & Interactions for SPDYE7P Gene

SuperPathways for SPDYE7P Gene

No Data Available

Interacting Proteins for SPDYE7P Gene

Gene Ontology (GO) - Biological Process for SPDYE7P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0045859 regulation of protein kinase activity IBA --
genes like me logo Genes that share ontologies with SPDYE7P: view

No data available for Pathways by source and SIGNOR curated interactions for SPDYE7P Gene

Transcripts for SPDYE7P Gene

mRNA/cDNA for SPDYE7P Gene

(1) REFSEQ mRNAs :
(1) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SPDYE7P Gene

No ASD Table

Relevant External Links for SPDYE7P Gene

GeneLoc Exon Structure for
SPDYE7P
ECgene alternative splicing isoforms for
SPDYE7P

Expression for SPDYE7P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SPDYE7P Gene

mRNA differential expression in normal tissues according to GTEx for SPDYE7P Gene

This gene is overexpressed in Testis (x37.3).

NURSA nuclear receptor signaling pathways regulating expression of SPDYE7P Gene:

SPDYE7P

SOURCE GeneReport for Unigene cluster for SPDYE7P Gene:

Hs.591819
genes like me logo Genes that share expression patterns with SPDYE7P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SPDYE7P Gene

Orthologs for SPDYE7P Gene

Evolution for SPDYE7P Gene

ENSEMBL:
Gene Tree for SPDYE7P (if available)
TreeFam:
Gene Tree for SPDYE7P (if available)

No data available for Orthologs for SPDYE7P Gene

Paralogs for SPDYE7P Gene

(9) SIMAP similar genes for SPDYE7P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with SPDYE7P: view

No data available for Paralogs for SPDYE7P Gene

Variants for SPDYE7P Gene

Sequence variations from dbSNP and Humsavar for SPDYE7P Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1061087 -- 72,869,075(+) CCAAA(C/T)CACTC nc-transcript-variant
rs111342608 -- 72,869,765(+) CTCCC(A/G)AGTAG upstream-variant-2KB
rs111928782 -- 72,867,121(+) AGGAA(A/G)GAAGA intron-variant
rs112587693 -- 72,866,508(+) AGAGG(A/C)AGATT intron-variant
rs113026885 -- 72,864,583(+) AGCAC(A/T)TTGGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SPDYE7P Gene

Variant ID Type Subtype PubMed ID
nsv981662 CNV duplication 23825009
nsv981523 CNV duplication 23825009
nsv967330 CNV duplication 23825009
nsv8133 CNV gain 18304495
nsv520573 CNV gain+loss 19592680
nsv469793 CNV gain 16826518
nsv428171 CNV gain 18775914
nsv1023115 CNV gain 25217958
nsv1017637 CNV loss 25217958
esv3613677 CNV gain 21293372
esv3613675 CNV gain 21293372
esv34349 CNV gain 17911159
esv2759537 CNV gain+loss 17122850
esv23205 CNV gain 19812545
dgv6464n100 CNV gain 25217958
dgv6462n100 CNV gain 25217958
dgv6460n100 CNV gain 25217958
dgv1116n67 CNV gain 20364138

Relevant External Links for SPDYE7P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SPDYE7P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SPDYE7P Gene

Disorders for SPDYE7P Gene

Relevant External Links for SPDYE7P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SPDYE7P

No disorders were found for SPDYE7P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SPDYE7P Gene

Publications for SPDYE7P Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 64
  2. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier L.W. … Wilson R.K. (Nature 2003) 4 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for SPDYE7P Gene

Sources for SPDYE7P Gene

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