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Aliases for SPDYE2B Gene

Aliases for SPDYE2B Gene

  • Speedy/RINGO Cell Cycle Regulator Family Member E2B 2 3
  • Putative Speedy Protein E2-Like Protein 3
  • Putative WBSCR19-Like Protein 3 3
  • WBSCR19-Like Protein 3 3
  • Speedy Protein E2B 3
  • SPDYE2L 3

External Ids for SPDYE2B Gene

Summaries for SPDYE2B Gene

GeneCards Summary for SPDYE2B Gene

SPDYE2B (Speedy/RINGO Cell Cycle Regulator Family Member E2B) is a Protein Coding gene. An important paralog of this gene is SPDYE3.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPDYE2B Gene

Genomics for SPDYE2B Gene

Genomic Location for SPDYE2B Gene

Start:
102,650,325 bp from pter
End:
102,662,084 bp from pter
Size:
11,760 bases
Orientation:
Plus strand

Genomic View for SPDYE2B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SPDYE2B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPDYE2B Gene

No data available for Regulatory Elements for SPDYE2B Gene

Proteins for SPDYE2B Gene

  • Protein details for SPDYE2B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NHP3-SPE2B_HUMAN
    Recommended name:
    Speedy protein E2B
    Protein Accession:
    A6NHP3
    Secondary Accessions:
    • D6RBN0

    Protein attributes for SPDYE2B Gene

    Size:
    402 amino acids
    Molecular mass:
    48290 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for SPDYE2B Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for SPDYE2B Gene

Proteomics data for SPDYE2B Gene at MOPED

Post-translational modifications for SPDYE2B Gene

No Post-translational modifications

Other Protein References for SPDYE2B Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for SPDYE2B Gene

Domains for SPDYE2B Gene

Gene Families for SPDYE2B Gene

HGNC:
  • SPDY :Speedy homologs

Protein Domains for SPDYE2B Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

SPE2B_HUMAN
Family:
  • Belongs to the Speedy/Ringo family.:
    • A6NHP3
genes like me logo Genes that share domains with SPDYE2B: view

Function for SPDYE2B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SPDYE2B Gene

Localization for SPDYE2B Gene

No data available for Gene Ontology (GO) - Cellular Components for SPDYE2B Gene

Pathways for SPDYE2B Gene

SuperPathways for SPDYE2B Gene

No Data Available

Interacting Proteins for SPDYE2B Gene

Gene Ontology (GO) - Biological Process for SPDYE2B Gene

None

No data available for Pathways by source for SPDYE2B Gene

Transcripts for SPDYE2B Gene

mRNA/cDNA for SPDYE2B Gene

(4) REFSEQ mRNAs :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SPDYE2B Gene

No ASD Table

Relevant External Links for SPDYE2B Gene

GeneLoc Exon Structure for
SPDYE2B
ECgene alternative splicing isoforms for
SPDYE2B

Expression for SPDYE2B Gene

mRNA expression in normal human tissues for SPDYE2B Gene

mRNA differential expression in normal tissues according to GTEx for SPDYE2B Gene

This gene is overexpressed in Testis (9.2).
genes like me logo Genes that share expressions with SPDYE2B: view

Orthologs for SPDYE2B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SPDYE2B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 37
  • 90 (a)
OneToMany
cow
(Bos Taurus)
Mammalia -- 37
  • 49 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 37
  • 66 (a)
ManyToMany
-- 37
  • 66 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia 4933411G11Rik 37
  • 49 (a)
ManyToMany
Spdyb 37
  • 48 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia -- 37
  • 35 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 37
  • 33 (a)
ManyToMany
-- 37
  • 34 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 37
  • 20 (a)
OneToMany
Species with no ortholog for SPDYE2B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SPDYE2B Gene

ENSEMBL:
Gene Tree for SPDYE2B (if available)
TreeFam:
Gene Tree for SPDYE2B (if available)

Paralogs for SPDYE2B Gene

Paralogs for SPDYE2B Gene

Selected SIMAP similar genes for SPDYE2B Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with SPDYE2B: view

Variants for SPDYE2B Gene

Relevant External Links for SPDYE2B Gene

HapMap Linkage Disequilibrium report
SPDYE2B

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for SPDYE2B Gene

Disorders for SPDYE2B Gene

No disorders were found for SPDYE2B Gene.

No data available for UniProtKB/Swiss-Prot for SPDYE2B Gene

Publications for SPDYE2B Gene

  1. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier L.W. … Wilson R.K. (Nature 2003) 3 4

Products for SPDYE2B Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SPDYE2B
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SPDYE2B
    • Block miRNA regulation of SPDYE2B using miScript Target Protectors

    Sources for SPDYE2B Gene

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