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Aliases for SPATA8-AS1 Gene

Subcategory (RNA class) for SPATA8-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for SPATA8-AS1 Gene

  • SPATA8 Antisense RNA 1 (Head To Head) 2 3

External Ids for SPATA8-AS1 Gene

ORGUL Members for SPATA8-AS1 Gene

Summaries for SPATA8-AS1 Gene

GeneCards Summary for SPATA8-AS1 Gene

SPATA8-AS1 (SPATA8 Antisense RNA 1 (Head To Head)) is a RNA Gene, and belongs to lncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPATA8-AS1 Gene

Genomics for SPATA8-AS1 Gene

Genomic Location for SPATA8-AS1 Gene

Start:
96,772,005 bp from pter
End:
96,783,337 bp from pter
Size:
11,333 bases
Orientation:
Minus strand

Genomic View for SPATA8-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SPATA8-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPATA8-AS1 Gene

No data available for Regulatory Elements for SPATA8-AS1 Gene

Proteins for SPATA8-AS1 Gene

Post-translational modifications for SPATA8-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SPATA8-AS1 Gene

Domains for SPATA8-AS1 Gene

Gene Families for SPATA8-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with SPATA8-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SPATA8-AS1 Gene

Function for SPATA8-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SPATA8-AS1 Gene

Localization for SPATA8-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for SPATA8-AS1 Gene

Pathways for SPATA8-AS1 Gene

SuperPathways for SPATA8-AS1 Gene

No Data Available

Interacting Proteins for SPATA8-AS1 Gene

Gene Ontology (GO) - Biological Process for SPATA8-AS1 Gene

None

No data available for Pathways by source for SPATA8-AS1 Gene

Transcripts for SPATA8-AS1 Gene

mRNA/cDNA for SPATA8-AS1 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SPATA8-AS1 Gene

No ASD Table

Relevant External Links for SPATA8-AS1 Gene

GeneLoc Exon Structure for
SPATA8-AS1
ECgene alternative splicing isoforms for
SPATA8-AS1

Expression for SPATA8-AS1 Gene

mRNA expression in normal human tissues for SPATA8-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for SPATA8-AS1 Gene

This gene is overexpressed in Testis (53.0).
genes like me logo Genes that share expressions with SPATA8-AS1: view

Orthologs for SPATA8-AS1 Gene

Evolution for SPATA8-AS1 Gene

ENSEMBL:
Gene Tree for SPATA8-AS1 (if available)
TreeFam:
Gene Tree for SPATA8-AS1 (if available)

No data available for Orthologs for SPATA8-AS1 Gene

Paralogs for SPATA8-AS1 Gene

No data available for Paralogs for SPATA8-AS1 Gene

Variants for SPATA8-AS1 Gene

Sequence variations from dbSNP and Humsavar for SPATA8-AS1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs953827 -- 96,779,707(-) CCTTC(C/T)CTGGG intron-variant
rs1393884 -- 96,779,494(+) CCATG(G/T)GGTGG intron-variant
rs1393885 -- 96,779,713(+) GAAGG(A/G)TGAGG intron-variant
rs1393886 -- 96,779,714(+) AAGGA(C/T)GAGGG intron-variant
rs1532761 -- 96,780,409(+) TTTTC(A/G)TCCTG intron-variant

Relevant External Links for SPATA8-AS1 Gene

HapMap Linkage Disequilibrium report
SPATA8-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for SPATA8-AS1 Gene

Disorders for SPATA8-AS1 Gene

No disorders were found for SPATA8-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for SPATA8-AS1 Gene

Publications for SPATA8-AS1 Gene

No publications were found for SPATA8-AS1 Gene.

Products for SPATA8-AS1 Gene

Sources for SPATA8-AS1 Gene

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