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Aliases for SPATA8-AS1 Gene

Subcategory (RNA class) for SPATA8-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SPATA8-AS1 Gene

  • SPATA8 Antisense RNA 1 (Head To Head) 2 3 5

External Ids for SPATA8-AS1 Gene

Previous GeneCards Identifiers for SPATA8-AS1 Gene

  • GC15M098077
  • GC15M098327

Summaries for SPATA8-AS1 Gene

GeneCards Summary for SPATA8-AS1 Gene

SPATA8-AS1 (SPATA8 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPATA8-AS1 Gene

Genomics for SPATA8-AS1 Gene

Genomic Location for SPATA8-AS1 Gene

Chromosome:
15
Start:
96,772,005 bp from pter
End:
96,783,337 bp from pter
Size:
11,333 bases
Orientation:
Minus strand

Genomic View for SPATA8-AS1 Gene

Genes around SPATA8-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SPATA8-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SPATA8-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPATA8-AS1 Gene

No data available for Regulatory Elements for SPATA8-AS1 Gene

Proteins for SPATA8-AS1 Gene

Post-translational modifications for SPATA8-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SPATA8-AS1 Gene

Domains & Families for SPATA8-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SPATA8-AS1 Gene

Function for SPATA8-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SPATA8-AS1 Gene

Localization for SPATA8-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SPATA8-AS1 Gene

Pathways & Interactions for SPATA8-AS1 Gene

SuperPathways for SPATA8-AS1 Gene

No Data Available

Interacting Proteins for SPATA8-AS1 Gene

Gene Ontology (GO) - Biological Process for SPATA8-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SPATA8-AS1 Gene

Drugs & Compounds for SPATA8-AS1 Gene

No Compound Related Data Available

Transcripts for SPATA8-AS1 Gene

mRNA/cDNA for SPATA8-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SPATA8-AS1 Gene

No ASD Table

Relevant External Links for SPATA8-AS1 Gene

GeneLoc Exon Structure for
SPATA8-AS1
ECgene alternative splicing isoforms for
SPATA8-AS1

Expression for SPATA8-AS1 Gene

mRNA expression in normal human tissues for SPATA8-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for SPATA8-AS1 Gene

This gene is overexpressed in Testis (x53.0).
genes like me logo Genes that share expression patterns with SPATA8-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SPATA8-AS1 Gene

Orthologs for SPATA8-AS1 Gene

Evolution for SPATA8-AS1 Gene

ENSEMBL:
Gene Tree for SPATA8-AS1 (if available)
TreeFam:
Gene Tree for SPATA8-AS1 (if available)

No data available for Orthologs for SPATA8-AS1 Gene

Paralogs for SPATA8-AS1 Gene

No data available for Paralogs for SPATA8-AS1 Gene

Variants for SPATA8-AS1 Gene

Sequence variations from dbSNP and Humsavar for SPATA8-AS1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs953827 -- 96,779,707(-) CCTTC(C/T)CTGGG intron-variant
rs1393884 -- 96,779,494(+) CCATG(G/T)GGTGG intron-variant
rs1393885 -- 96,779,713(+) GAAGG(A/G)TGAGG intron-variant
rs1393886 -- 96,779,714(+) AAGGA(C/T)GAGGG intron-variant
rs1532761 -- 96,780,409(+) TTTTC(A/G)TCCTG intron-variant

Relevant External Links for SPATA8-AS1 Gene

HapMap Linkage Disequilibrium report
SPATA8-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SPATA8-AS1 Gene

Disorders for SPATA8-AS1 Gene

Relevant External Links for SPATA8-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SPATA8-AS1

No disorders were found for SPATA8-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SPATA8-AS1 Gene

Publications for SPATA8-AS1 Gene

No publications were found for SPATA8-AS1 Gene.

Products for SPATA8-AS1 Gene

Sources for SPATA8-AS1 Gene

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