Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

SPATA5L1 Gene

protein-coding   GIFtS: 47
GCID: GC15P045694

spermatogenesis associated 5-like 1

 Explore 3 diseases affiliated with
SPATA5L1 via our new
 Human Malady Compendium 
Biological research products
for SPATA5L1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

This gene clusters with an RNA gene
Subcategory (RNA class): lncRNA

Quality score for the ORGUL clustered with this gene is 3

Aliases
Spermatogenesis Associated 5-Like 11 2
FLJ122861
MGC53471
Spermatogenesis-Associated Protein 5-Like Protein 12
EC 1.1.1.1008
EC 3.4.248

External Ids:    HGNC: 287621   Entrez Gene: 790292   Ensembl: ENSG000001717637   UniProtKB: Q9BVQ73   
ORGUL members:         
NONCODE:n407939    

Export aliases for SPATA5L1 gene to outside databases

Previous GC identifers: GC15P043411 GC15P043481 GC15P022518


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

  --

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000015.9  NC_018926.1  NT_010194.17  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the SPATA5L1 gene promoter:
         Max1   USF1   NRSF form 1   NRSF form 2   AP-2gamma   USF-1   AP-2beta   AP-2alpha   c-Myc   AP-2alphaA   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidSPATA5L1 promoter sequence
   Search SABiosciences Chromatin IP Primers for SPATA5L1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SPATA5L1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 15q21.1   Ensembl cytogenetic band:  15q21.1   HGNC cytogenetic band: 15q15.1

SPATA5L1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SPATA5L1 gene location

GeneLoc information about chromosome 15         GeneLoc Exon Structure

GeneLoc location for GC15P045694:  view genomic region     (about GC identifiers)

Start:
45,694,519 bp from pter      End:
45,713,617 bp from pter
Size:
19,099 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: SPA5L_HUMAN, Q9BVQ7 (See protein sequence)
Recommended Name: Spermatogenesis-associated protein 5-like protein 1  
Size: 753 amino acids; 80710 Da
Subcellular location: Cytoplasm (Potential)
Secondary accessions: C9JHR5 Q9H8W7 Q9HA41
Alternative splicing: 3 isoforms:  Q9BVQ7-1   Q9BVQ7-2   Q9BVQ7-3   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for SPATA5L1: NX_Q9BVQ7

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9BVQ7

  • 2 DME Specific Peptides for SPATA5L1 (Q9BVQ7)
     ARELASRG  TNRPDVLD 

    SPATA5L1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_076968.2  
    ENSEMBL proteins: 
     ENSP00000305494   ENSP00000453406   ENSP00000436823   ENSP00000453091   ENSP00000431242  

    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    OriGene Protein Over-expression Lysate: SPATA5L1
    OriGene Custom Protein Services for SPATA5L1 
    GenScript Custom Purified and Recombinant Proteins Services for SPATA5L1
    Novus Biologicals SPATA5L1 Protein
    Novus Biologicals SPATA5L1 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for SPATA5L1

    Gene Ontology (GO): 1 cellular component term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005737cytoplasm IEA--


    SPATA5L1 for ontologies           About GeneDecksing



    SPATA5L1 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for SPATA5L1 
    GenScript Custom Superior Antibodies Services for SPATA5L1
    Novus Biologicals SPATA5L1 Antibodies
    Search for Antibodies for SPATA5L1 at Abcam  
    Uscn Antibodies for SPATA5L1
    Search ThermoFisher Antibodies for SPATA5L1

    Assay Products for SPATA5L1: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for SPATA5L1
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for SPATA5L1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    SPATA5L1 for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR003959 ATPase_AAA_core
     IPR003960 ATPase_AAA_CS
     IPR003593 AAA+_ATPase

    Graphical View of Domain Structure for InterPro Entry Q9BVQ7

    ProtoNet protein and cluster: Q9BVQ7

    UniProtKB/Swiss-Prot: SPA5L_HUMAN, Q9BVQ7
    Similarity: Belongs to the AAA ATPase family. AFG2 subfamily


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Enzyme Numbers (IUBMB): EC 1.1.1.1002 EC 3.4.242

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: SPATA5L1
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SPATA5L1
    1 QIAGEN miScript miRNA Assays for microRNA that regulate SPATA5L1:
    hsa-miR-374a*
    SwitchGear 3'UTR luciferase reporter plasmidSPATA5L1 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SPATA5L1 (see all 4)
    OriGene shRNA RFP: SPATA5L1
    OriGene siRNA: SPATA5L1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SPATA5L1

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for SPATA5L1

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SPATA5L1 (see all 2)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SPATA5L1 (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: SPATA5L1 (NM_024063)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SPATA5L1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SPATA5L1 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for SPATA5L1
    Search LifeMap BioReagents cell lines for SPATA5L1

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SPATA5L1

    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005524ATP binding IEA--
    GO:0017111nucleoside-triphosphatase activity IEA--


    SPATA5L1 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for SPATA5L1:
     Increased HPV18 LCR reporter a 


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for SPATA5L1

    STRING Interaction Network Preview (showing 2 interactants - click image to see more details)

    5/558 Interacting proteins for SPATA5L1 (Q9BVQ72 ENSP000003054944) via UniProtKB, MINT, STRING, and/or I2D (see all 558)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    SNW1Q135732, ENSP000002615314MINT-7945693 STRING: ENSP00000261531
    ABCF1Q8NE712MINT-7945693
    ABCF3Q9NUQ82MINT-7945693
    ACIN1Q9UKV32MINT-7945693
    ACTBP607092MINT-7945693
    About this table

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for SPATA5L1
    Search CenterWatch for drugs/clinical trials and news about SPATA5L1 / SPA5L 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for SPATA5L1 gene: 
    NM_024063.2  

    Unigene Cluster for SPATA5L1:

    Spermatogenesis associated 5-like 1
    Hs.369657  [show with all ESTs]
    Unigene Representative Sequence: NR_027635
    7 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000305560(uc001zvf.3 uc001zve.3) ENST00000559860 ENST00000531970
    ENST00000525552 ENST00000531624 ENST00000533199 ENST00000533841

    miRNA
    Products:
         
    OriGene 3'-UTR Clone: SPATA5L1
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SPATA5L1
    1 QIAGEN miScript miRNA Assays for microRNA that regulate SPATA5L1:
    hsa-miR-374a*
    SwitchGear 3'UTR luciferase reporter plasmidSPATA5L1 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SPATA5L1 (see all 4)
    OriGene shRNA RFP: SPATA5L1
    OriGene siRNA: SPATA5L1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SPATA5L1
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SPATA5L1 (see all 2)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SPATA5L1 (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: SPATA5L1 (NM_024063)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SPATA5L1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SPATA5L1 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SPATA5L1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse / rat SPATA5L1
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SPATA5L1
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SPATA5L1

    Additional cDNA sequence: 

    AF086107.1 AK225463.1 AK291457.1 BC000981.2 BC051861.2 NR_027635.1 

    7 DOTS entries:

    DT.213146  DT.100766264  DT.100776101  DT.97842024  DT.95270476  DT.100706886  DT.40273075 

    24/122 AceView cDNA sequences (see all 122):

    AF086107 BU730064 AI745238 AW022372 D20163 AA451905 BQ212534 AW594432 
    AA176698 BG032629 AA174003 BM991912 AW471289 CA414529 AI656138 BG944281 
    BU615405 T35813 CA432318 BX114031 BG261320 AU132105 BX384574 AA451980 

    GeneLoc Exon Structure

    5/6 Alternative Splicing Database (ASD) splice patterns (SP) for SPATA5L1 (see all 6)    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7 ^ 8a · 8b ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15
    SP1:                                                                                                            
    SP2:                                      -                                                                     
    SP3:                                                                    -           -                           
    SP4:                                                                          -     -                 -         
    SP5:                                                                                                            


    ECgene alternative splicing isoforms for SPATA5L1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    SPATA5L1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CCAATAGGGC

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See SPATA5L1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for SPATA5L1

    SOURCE GeneReport for Unigene cluster: Hs.369657
        SABiosciences Custom PCR Arrays for SPATA5L1
    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SPATA5L1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse / rat SPATA5L1
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SPATA5L1
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SPATA5L1
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SPATA5L1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for SPATA5L1 gene from 5/18 species (see all 18)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves SPATA5L11 spermatogenesis associated 5-like 1 66.99(n)
    64.87(a)
      415441  XM_001232156.2  XP_001232157.2 
    lizard
    (Anolis carolinensis)
    Reptilia SPATA5L16
    --
    59(a)
    1 ↔ 1
    GL343506.1(29363-33658)
    zebrafish
    (Danio rerio)
    Actinopterygii spata5l11 spermatogenesis associated 5-like 1 56.51(n)
    54.35(a)
      767648  NM_001076588.2  NP_001070056.2 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons CDC48B1 cell division control protein 48-B 50.32(n)
    45.19(a)
      814895  NM_126415.5  NP_178463.1 
    rice
    (Oryza sativa)
    Liliopsida Os05g03762001 hypothetical protein 51.01(n)
    46.11(a)
      4338614  NM_001061915.1  NP_001055380.1 


    ENSEMBL Gene Tree for SPATA5L1 (if available)
    TreeFam Gene Tree for SPATA5L1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for SPATA5L1 gene
    VCP2  SPATA52  
    10 SIMAP similar genes for SPATA5L1 using alignment to 3 protein entries:     SPA5L_HUMAN (see all proteins):
    DKFZp434K0126    SPATA5    VCP    PSMC5    PSMC1    PSMC3
    PSMC6    PSMC2    PSMC4    NVL

    SPATA5L1 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/332 NCBI SNPs in SPATA5L1 are shown (see all 332    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 15 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1499183871,2
    --45692622(+) TGAAGA/GCCCAG 2 -- us2k10--------
    rs24862711,2
    C,F,O,H,--45692634(-) GGAATT/CCTGTT 2 -- us2k112Minor allele frequency- C:0.24NA NS EA WA CSA 672
    rs1907554861,2
    --45692883(+) AACTTC/TATTGG 2 -- us2k10--------
    rs11538511,2
    C,F,H,--45693027(+) CCTCAG/ATAAGT 2 -- us2k119Minor allele frequency- A:0.29NS EA NA WA CSA 1916
    rs1464848621,2
    --45693147(+) TAGGGA/GTCGGT 2 -- us2k10--------
    rs353358671,2
    C,--45693164(+) ATGGCT/-TTTTT 2 -- us2k11Minor allele frequency- -:0.00CSA 2
    rs1410529821,2
    --45693235(+) CCAATC/GGGATT 2 -- us2k10--------
    rs767223071,2
    --45693281(+) TTATCC/TATTTC 2 -- us2k11Minor allele frequency- T:0.01NA 120
    rs38408321,2
    C,F,--45693769(+) GCTGGA/-AAAAA 2 -- us2k1 tfbs3 trp32Minor allele frequency- -:0.50NA CSA 4
    rs2011443341,2
    C--45693769(+) GCTGGA/GAAAAA 2 -- us2k10--------

    HapMap Linkage Disequilibrium report for SPATA5L1 (45694519 - 45713617 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for SPATA5L1: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SPATA5L1
    DNA2.0 Custom Variant and Variant Library Synthesis for SPATA5L1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    SPATA5L1 for disorders           About GeneDecksing

    3 diseases for SPATA5L1:    About MalaCards
    kidney disease    tuberculosis    mycobacterium tuberculosis

    Human Genome Epidemiology (HuGE) Navigator: SPATA5L1 (1 document)

    Export disorders for SPATA5L1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for SPATA5L1 gene, integrated from 9 sources (see all 12):
    (articles sorted by number of sources associating them with SPATA5L1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1, 3 Strausberg R.L....Marra M.A. (2002)
    3. Methods for quantification of in vivo changes in prote in ubiquitination following proteasome and deubiquitinase inhibition. (PubMed id 22505724)1 Udeshi N.D....Carr S.A. (2012)
    4. Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983)1 Kim W....Gygi S.P. (2011)
    5. Initial characterization of the human central proteome. (PubMed id 21269460)2 Burkard T.R.... Colinge J. (2011)
    6. Ubiquitin ligase substrate identification through qua ntitative proteomics at both the protein and peptide levels. (PubMed id 21987572)1 Lee K.A....Doedens J.R. (2011)
    7. New loci associated with kidney function and chronic kidney disease. (PubMed id 20383146)1 KAPttgen A....Fox C.S. (2010)
    8. Dynamics of cullin-RING ubiquitin ligase network revea led by systematic quantitative proteomics. (PubMed id 21145461)1 Bennett E.J....Harper J.W. (2010)
    9. Multiple loci associated with indices of renal function and chronic kidney disease. (PubMed id 19430482)1 KAPttgen A....Fox C.S. (2009)
    10. Analysis of the DNA sequence and duplication history of human chromosome 15. (PubMed id 16572171)2 Zody M.C....Nusbaum C. (2006)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 79029 HGNC: 28762 AceView: SPATA5L1 Ensembl:ENSG00000171763 euGenes: HUgn79029
    ECgene: SPATA5L1 H-InvDB: SPATA5L1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for SPATA5L1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for SPATA5L1 gene:
    Search GeneIP for patents involving SPATA5L1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for SPATA5L1  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SPATA5L1   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SPATA5L1  
     OriGene Protein Over-expression Lysate for SPATA5L1   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for SPATA5L1   OriGene 3'-UTR Clone for SPATA5L1  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SPATA5L1   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SPATA5L1  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for SPATA5L1   OriGene Custom Protein Services for SPATA5L1  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat SPATA5L1
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SPATA5L1
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SPATA5L1
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SPATA5L1
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SPATA5L1
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SPATA5L1
     GenScript Custom Purified and Recombinant Proteins Services for SPATA5L1 GenScript cDNA clones with any tag delivered in your preferred vector for SPATA5L1
     GenScript Custom Assay Services for SPATA5L1 GenScript Custom Superior Antibodies Services for SPATA5L1
     GenScript Custom overexpressing Cell Line Services for SPATA5L1 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in SPATA5L1 promoter
     Search Chromatin IP Primers for SPATA5L1
     RT2 qPCR Primer Assay in human, mouse / rat SPATA5L1
     Search GNC Networks for SPATA5L1
     SABiosciences Custom PCR Arrays for SPATA5L1
     Search Tocris compounds for SPATA5L1
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     SPATA5L1 antibodies
     SPATA5L1 proteins
     SPATA5L1 lysates
     Search for Antibodies for SPATA5L1 at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for SPATA5L1
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     SPATA5L1 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for SPATA5L1
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SPATA5L1
     SwitchGear 3'UTR luciferase reporter plasmids for SPATA5L1
     SwitchGear Promoter luciferase reporter plasmids for SPATA5L1
     Search ThermoFisher Antibodies for SPATA5L1
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SPATA5L1
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      SPATA5L1 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 100 solr: 1.4