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Aliases for SPATA42 Gene

Subcategory (RNA class) for SPATA42 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SPATA42 Gene

  • Spermatogenesis Associated 42 (Non-Protein Coding) 2 3 5
  • Spermatogenesis-Related Gene 7 2 3
  • AKNAD1 Antisense RNA 1 2 3
  • Spermatogenesis-Related Protein 7 3
  • AKNAD1-AS1 3
  • SRG7 3

External Ids for SPATA42 Gene

Previous GeneCards Identifiers for SPATA42 Gene

  • GC01P109402

Summaries for SPATA42 Gene

GeneCards Summary for SPATA42 Gene

SPATA42 (Spermatogenesis Associated 42 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPATA42 Gene

Genomics for SPATA42 Gene

Regulatory Elements for SPATA42 Gene

Enhancers for SPATA42 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around SPATA42 on UCSC Golden Path with GeneCards custom track

Genomic Location for SPATA42 Gene

Chromosome:
1
Start:
108,857,217 bp from pter
End:
108,858,524 bp from pter
Size:
1,308 bases
Orientation:
Plus strand

Genomic View for SPATA42 Gene

Genes around SPATA42 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SPATA42 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SPATA42 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPATA42 Gene

Proteins for SPATA42 Gene

Post-translational modifications for SPATA42 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SPATA42 Gene

Domains & Families for SPATA42 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SPATA42 Gene

Function for SPATA42 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SPATA42 Gene

Localization for SPATA42 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SPATA42 Gene

Pathways & Interactions for SPATA42 Gene

SuperPathways for SPATA42 Gene

No Data Available

Interacting Proteins for SPATA42 Gene

Gene Ontology (GO) - Biological Process for SPATA42 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SPATA42 Gene

Drugs & Compounds for SPATA42 Gene

No Compound Related Data Available

Transcripts for SPATA42 Gene

mRNA/cDNA for SPATA42 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SPATA42 Gene

No ASD Table

Relevant External Links for SPATA42 Gene

GeneLoc Exon Structure for
SPATA42
ECgene alternative splicing isoforms for
SPATA42

Expression for SPATA42 Gene

mRNA expression in normal human tissues for SPATA42 Gene

mRNA differential expression in normal tissues according to GTEx for SPATA42 Gene

This gene is overexpressed in Testis (x51.7).
genes like me logo Genes that share expression patterns with SPATA42: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SPATA42 Gene

Orthologs for SPATA42 Gene

Evolution for SPATA42 Gene

ENSEMBL:
Gene Tree for SPATA42 (if available)
TreeFam:
Gene Tree for SPATA42 (if available)

No data available for Orthologs for SPATA42 Gene

Paralogs for SPATA42 Gene

No data available for Paralogs for SPATA42 Gene

Variants for SPATA42 Gene

Relevant External Links for SPATA42 Gene

HapMap Linkage Disequilibrium report
SPATA42

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SPATA42 Gene

Disorders for SPATA42 Gene

Relevant External Links for SPATA42

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SPATA42

No disorders were found for SPATA42 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SPATA42 Gene

Publications for SPATA42 Gene

No publications were found for SPATA42 Gene.

Products for SPATA42 Gene

Sources for SPATA42 Gene

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