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Aliases for SPATA31D5P Gene

Aliases for SPATA31D5P Gene

  • SPATA31 Subfamily D, Member 5, Pseudogene 2 3
  • Family With Sequence Similarity 75, Member D5, Pseudogene 2 3
  • Family With Sequence Similarity 75, Member D5 2
  • FAM75-Like Protein FLJ46321 Pseudogene 3
  • FAM75D5P 3
  • FAM75D5 3

External Ids for SPATA31D5P Gene

Previous Symbols for SPATA31D5P Gene

  • FAM75D5

Summaries for SPATA31D5P Gene

GeneCards Summary for SPATA31D5P Gene

SPATA31D5P (SPATA31 Subfamily D, Member 5, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPATA31D5P Gene

Genomics for SPATA31D5P Gene

Genomic Location for SPATA31D5P Gene

Start:
81,913,437 bp from pter
End:
81,919,927 bp from pter
Size:
6,491 bases
Orientation:
Plus strand

Genomic View for SPATA31D5P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SPATA31D5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPATA31D5P Gene

No data available for Regulatory Elements for SPATA31D5P Gene

Proteins for SPATA31D5P Gene

Post-translational modifications for SPATA31D5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SPATA31D5P Gene

Domains for SPATA31D5P Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for SPATA31D5P Gene

Function for SPATA31D5P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SPATA31D5P Gene

Localization for SPATA31D5P Gene

No data available for Gene Ontology (GO) - Cellular Components for SPATA31D5P Gene

Pathways for SPATA31D5P Gene

SuperPathways for SPATA31D5P Gene

No Data Available

Interacting Proteins for SPATA31D5P Gene

Gene Ontology (GO) - Biological Process for SPATA31D5P Gene

None

No data available for Pathways by source for SPATA31D5P Gene

Transcripts for SPATA31D5P Gene

mRNA/cDNA for SPATA31D5P Gene

(1) REFSEQ mRNAs :
(6) Additional mRNA sequences :
(7) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SPATA31D5P Gene

SPATA31 subfamily D, member 5, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SPATA31D5P Gene

No ASD Table

Relevant External Links for SPATA31D5P Gene

GeneLoc Exon Structure for
SPATA31D5P
ECgene alternative splicing isoforms for
SPATA31D5P

Expression for SPATA31D5P Gene

mRNA expression in normal human tissues for SPATA31D5P Gene

mRNA differential expression in normal tissues according to GTEx for SPATA31D5P Gene

This gene is overexpressed in Testis (51.8).

SOURCE GeneReport for Unigene cluster for SPATA31D5P Gene Hs.215235

genes like me logo Genes that share expressions with SPATA31D5P: view

Orthologs for SPATA31D5P Gene

Evolution for SPATA31D5P Gene

ENSEMBL:
Gene Tree for SPATA31D5P (if available)
TreeFam:
Gene Tree for SPATA31D5P (if available)

No data available for Orthologs for SPATA31D5P Gene

Paralogs for SPATA31D5P Gene

No data available for Paralogs for SPATA31D5P Gene

Variants for SPATA31D5P Gene

Sequence variations from dbSNP and Humsavar for SPATA31D5P Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type MAF
rs513556 -- 81,917,284(-) ATGCT(C/G)TCTGA nc-transcript-variant
rs515305 -- 81,917,095(-) TTGAA(A/G)GACTT nc-transcript-variant
rs515355 -- 81,917,075(-) TACAG(C/G)ATTGG nc-transcript-variant
rs515389 -- 81,917,067(-) TGGTA(C/G)CTGGA nc-transcript-variant
rs528073 -- 81,918,386(-) GCTGT(A/G)TGTGG nc-transcript-variant

Relevant External Links for SPATA31D5P Gene

HapMap Linkage Disequilibrium report
SPATA31D5P

No data available for Structural Variations from Database of Genomic Variants (DGV) for SPATA31D5P Gene

Disorders for SPATA31D5P Gene

No disorders were found for SPATA31D5P Gene.

No data available for UniProtKB/Swiss-Prot for SPATA31D5P Gene

Publications for SPATA31D5P Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for SPATA31D5P Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SPATA31D5P
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SPATA31D5P
    • Block miRNA regulation of SPATA31D5P using miScript Target Protectors

    Sources for SPATA31D5P Gene

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