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Aliases for SPATA31B1P Gene

Aliases for SPATA31B1P Gene

  • SPATA31 Subfamily B, Member 1, Pseudogene 2 3
  • Family With Sequence Similarity 75, Member B 2 3
  • SPATA31B1 3 4
  • C9orf36B 3 4
  • FAM75B 3 4
  • Spermatogenesis-Associated Protein 31B1 Pseudogene 4
  • Chromosome 9 Open Reading Frame 36B 2
  • SPATA31 Subfamily B, Member 1 2
  • BA388B24.2 3

External Ids for SPATA31B1P Gene

Previous HGNC Symbols for SPATA31B1P Gene

  • C9orf36B
  • FAM75B
  • SPATA31B1

Previous GeneCards Identifiers for SPATA31B1P Gene

  • GC09M084979

Summaries for SPATA31B1P Gene

GeneCards Summary for SPATA31B1P Gene

SPATA31B1P (SPATA31 Subfamily B, Member 1, Pseudogene) is a Pseudogene.

UniProtKB/Swiss-Prot for SPATA31B1P Gene

  • May play a role in spermatogenesis.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPATA31B1P Gene

Genomics for SPATA31B1P Gene

Genomic Location for SPATA31B1P Gene

Start:
82,057,647 bp from pter
End:
82,063,682 bp from pter
Size:
6,036 bases
Orientation:
Minus strand

Genomic View for SPATA31B1P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SPATA31B1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPATA31B1P Gene

No data available for Regulatory Elements for SPATA31B1P Gene

Proteins for SPATA31B1P Gene

  • Protein details for SPATA31B1P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5VZV4-S31B1_HUMAN
    Recommended name:
    Putative spermatogenesis-associated protein 31B1
    Protein Accession:
    Q5VZV4
    Secondary Accessions:

    Protein attributes for SPATA31B1P Gene

    Size:
    182 amino acids
    Molecular mass:
    19635 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SPATA31B1P Gene

Proteomics data for SPATA31B1P Gene at MOPED

Post-translational modifications for SPATA31B1P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SPATA31B1P Gene

Domains for SPATA31B1P Gene

Protein Domains for SPATA31B1P Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

Q5VZV4

UniProtKB/Swiss-Prot:

S31B1_HUMAN :
  • Q5VZV4
Family:
  • Belongs to the SPATA31 family.
genes like me logo Genes that share domains with SPATA31B1P: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for SPATA31B1P Gene

Function for SPATA31B1P Gene

Molecular function for SPATA31B1P Gene

UniProtKB/Swiss-Prot Function: May play a role in spermatogenesis.

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SPATA31B1P Gene

Localization for SPATA31B1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SPATA31B1P Gene

Pathways for SPATA31B1P Gene

SuperPathways for SPATA31B1P Gene

No Data Available

Interacting Proteins for SPATA31B1P Gene

Gene Ontology (GO) - Biological Process for SPATA31B1P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007283 spermatogenesis IEA --
GO:0030154 cell differentiation IEA --
genes like me logo Genes that share ontologies with SPATA31B1P: view

No data available for Pathways by source for SPATA31B1P Gene

Transcripts for SPATA31B1P Gene

mRNA/cDNA for SPATA31B1P Gene

(2) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SPATA31B1P
    • Block miRNA regulation of SPATA31B1P using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for SPATA31B1P

    Primer Products

    • OriGene qSTAR qPCR primer pairs in human,mouse,rat for SPATA31B1P

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for SPATA31B1P Gene

    No ASD Table

    Relevant External Links for SPATA31B1P Gene

    GeneLoc Exon Structure for
    SPATA31B1P
    ECgene alternative splicing isoforms for
    SPATA31B1P

    Expression for SPATA31B1P Gene

    mRNA expression in normal human tissues for SPATA31B1P Gene

    mRNA differential expression in normal tissues according to GTEx for SPATA31B1P Gene

    This gene is overexpressed in Testis (31.3).

    Integrated Proteomics: protein expression from ProteomicsDB and MOPED for SPATA31B1P Gene

    genes like me logo Genes that share expressions with SPATA31B1P: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for SPATA31B1P Gene

    Orthologs for SPATA31B1P Gene

    Evolution for SPATA31B1P Gene

    ENSEMBL:
    Gene Tree for SPATA31B1P (if available)
    TreeFam:
    Gene Tree for SPATA31B1P (if available)

    No data available for Orthologs for SPATA31B1P Gene

    Paralogs for SPATA31B1P Gene

    No data available for Paralogs for SPATA31B1P Gene

    Variants for SPATA31B1P Gene

    Sequence variations from dbSNP and Humsavar for SPATA31B1P Gene

    SNP ID Clin Chr 09 pos Sequence Context AA Info Type MAF
    rs7019805 -- 82,060,882(+) AAGCC(A/G)CCAAA nc-transcript-variant
    rs10867829 -- 82,059,881(+) TCTCC(A/G)GAGTT nc-transcript-variant
    rs11139485 -- 82,062,672(+) CAGGC(A/G)TGGTG upstream-variant-2KB
    rs12001732 -- 82,062,186(+) CCCTC(C/T)GGGAC intron-variant
    rs12342760 -- 82,057,364(+) GGAAA(C/T)GTAAG downstream-variant-500B

    Relevant External Links for SPATA31B1P Gene

    HapMap Linkage Disequilibrium report
    SPATA31B1P

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for SPATA31B1P Gene

    Disorders for SPATA31B1P Gene

    No disorders were found for SPATA31B1P Gene.

    No data available for UniProtKB/Swiss-Prot for SPATA31B1P Gene

    Publications for SPATA31B1P Gene

    1. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 4

    Products for SPATA31B1P Gene

    Sources for SPATA31B1P Gene

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