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Aliases for SPATA31B1P Gene

Aliases for SPATA31B1P Gene

  • SPATA31 Subfamily B Member 1, Pseudogene 2 3 5
  • Family With Sequence Similarity 75, Member B 2 3
  • SPATA31B1 3 4
  • C9orf36B 3 4
  • FAM75B 3 4
  • Spermatogenesis-Associated Protein 31B1 Pseudogene 4
  • Chromosome 9 Open Reading Frame 36B 2
  • SPATA31 Subfamily B, Member 1 2

External Ids for SPATA31B1P Gene

Previous HGNC Symbols for SPATA31B1P Gene

  • C9orf36B
  • FAM75B
  • SPATA31B1

Previous GeneCards Identifiers for SPATA31B1P Gene

  • GC09M084979

Summaries for SPATA31B1P Gene

GeneCards Summary for SPATA31B1P Gene

SPATA31B1P (SPATA31 Subfamily B Member 1, Pseudogene) is a Pseudogene.

UniProtKB/Swiss-Prot for SPATA31B1P Gene

  • May play a role in spermatogenesis.

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPATA31B1P Gene

Genomics for SPATA31B1P Gene

Regulatory Elements for SPATA31B1P Gene

Enhancers for SPATA31B1P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G082020 0.8 Ensembl ENCODE 11 +42.0 41986 1.9 JUND BHLHE40 FOS ATF2 RAD21 MAFK SPATA31B1P GC09P082014 PIR46808
GH09G082148 0.8 ENCODE 11 -85.3 -85348 1.3 KLF1 ARNT FEZF1 RAD21 ZNF366 ZNF600 PRDM10 ZBTB20 SCRT1 OVOL3 SPATA31B1P GC09P082135 GC09P082236
GH09G082031 0.7 ENCODE 11.6 +31.7 31707 0.9 PKNOX1 SIN3A MAX MNT RAD21 JUND RAD51 GATA3 FOSL2 FOS SPATA31B1P PIR46808 GC09P082014
GH09G082270 0.4 ENCODE 10.4 -207.6 -207608 1.7 MAFK SPATA31B1P PIR37439 GC09P082257 GC09P082258 GC09P082259 PIR31661 GC09P082261 GC09P082260
GH09G082117 0.2 ENCODE 10.7 -53.9 -53900 0.1 SPATA31B1P GC09M082310 RPS2P34
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SPATA31B1P on UCSC Golden Path with GeneCards custom track

Genomic Location for SPATA31B1P Gene

Chromosome:
9
Start:
82,057,542 bp from pter
End:
82,063,724 bp from pter
Size:
6,183 bases
Orientation:
Minus strand

Genomic View for SPATA31B1P Gene

Genes around SPATA31B1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SPATA31B1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SPATA31B1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPATA31B1P Gene

Proteins for SPATA31B1P Gene

  • Protein details for SPATA31B1P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5VZV4-S31B1_HUMAN
    Recommended name:
    Putative spermatogenesis-associated protein 31B1
    Protein Accession:
    Q5VZV4

    Protein attributes for SPATA31B1P Gene

    Size:
    182 amino acids
    Molecular mass:
    19635 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SPATA31B1P Gene

Post-translational modifications for SPATA31B1P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SPATA31B1P Gene

Domains & Families for SPATA31B1P Gene

Protein Domains for SPATA31B1P Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for SPATA31B1P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q5VZV4

UniProtKB/Swiss-Prot:

S31B1_HUMAN :
  • Belongs to the SPATA31 family.
Family:
  • Belongs to the SPATA31 family.
genes like me logo Genes that share domains with SPATA31B1P: view

No data available for Gene Families for SPATA31B1P Gene

Function for SPATA31B1P Gene

Molecular function for SPATA31B1P Gene

UniProtKB/Swiss-Prot Function:
May play a role in spermatogenesis.

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SPATA31B1P Gene

Localization for SPATA31B1P Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for SPATA31B1P gene
Compartment Confidence
nucleus 2
cytosol 2
extracellular 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for SPATA31B1P Gene

Pathways & Interactions for SPATA31B1P Gene

SuperPathways for SPATA31B1P Gene

No Data Available

Interacting Proteins for SPATA31B1P Gene

Gene Ontology (GO) - Biological Process for SPATA31B1P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007283 spermatogenesis IEA --
GO:0030154 cell differentiation IEA --
genes like me logo Genes that share ontologies with SPATA31B1P: view

No data available for Pathways by source and SIGNOR curated interactions for SPATA31B1P Gene

Drugs & Compounds for SPATA31B1P Gene

No Compound Related Data Available

Transcripts for SPATA31B1P Gene

mRNA/cDNA for SPATA31B1P Gene

(2) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SPATA31B1P Gene

No ASD Table

Relevant External Links for SPATA31B1P Gene

GeneLoc Exon Structure for
SPATA31B1P
ECgene alternative splicing isoforms for
SPATA31B1P

Expression for SPATA31B1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SPATA31B1P Gene

mRNA differential expression in normal tissues according to GTEx for SPATA31B1P Gene

This gene is overexpressed in Testis (x31.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for SPATA31B1P Gene



NURSA nuclear receptor signaling pathways regulating expression of SPATA31B1P Gene:

SPATA31B1P
genes like me logo Genes that share expression patterns with SPATA31B1P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SPATA31B1P Gene

Orthologs for SPATA31B1P Gene

Evolution for SPATA31B1P Gene

ENSEMBL:
Gene Tree for SPATA31B1P (if available)
TreeFam:
Gene Tree for SPATA31B1P (if available)

No data available for Orthologs for SPATA31B1P Gene

Paralogs for SPATA31B1P Gene

No data available for Paralogs for SPATA31B1P Gene

Variants for SPATA31B1P Gene

Relevant External Links for SPATA31B1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SPATA31B1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SPATA31B1P Gene

Disorders for SPATA31B1P Gene

No disorders were found for SPATA31B1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SPATA31B1P Gene

Publications for SPATA31B1P Gene

  1. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 4 64

Products for SPATA31B1P Gene

Sources for SPATA31B1P Gene

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