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Aliases for SPATA31A1 Gene

Aliases for SPATA31A1 Gene

  • SPATA31 Subfamily A, Member 1 2 3
  • Family With Sequence Similarity 75, Member A1 2 3
  • Family With Sequence Similarity 75, Member A2 2 3
  • SPATA31 Subfamily A, Member 2 2 3
  • Protein FAM75A1 3 4
  • C9orf36 3 4
  • FAM75A1 3 4
  • Spermatogenesis-Associated Protein 31A1 3
  • Spermatogenesis-Associated Protein 31A2 3
  • Chromosome 9 Open Reading Frame 36 2
  • Protein FAM75A2 3
  • SPATA31A2 3
  • C9orf36A 3
  • FAM75A2 3

External Ids for SPATA31A1 Gene

Previous Symbols for SPATA31A1 Gene

  • C9orf36
  • FAM75A1
  • SPATA31A2
  • FAM75A2

Summaries for SPATA31A1 Gene

GeneCards Summary for SPATA31A1 Gene

SPATA31A1 (SPATA31 Subfamily A, Member 1) is a Protein Coding gene. An important paralog of this gene is SPATA31A6.

UniProtKB/Swiss-Prot for SPATA31A1 Gene

  • May play a role in spermatogenesis.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPATA31A1 Gene

Genomics for SPATA31A1 Gene

Genomic Location for SPATA31A1 Gene

Start:
39,355,702 bp from pter
End:
39,361,959 bp from pter
Size:
6,258 bases
Orientation:
Plus strand

Genomic View for SPATA31A1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SPATA31A1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPATA31A1 Gene

No data available for Regulatory Elements for SPATA31A1 Gene

Proteins for SPATA31A1 Gene

  • Protein details for SPATA31A1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5TZJ5-S31A1_HUMAN
    Recommended name:
    Spermatogenesis-associated protein 31A1
    Protein Accession:
    Q5TZJ5
    Secondary Accessions:

    Protein attributes for SPATA31A1 Gene

    Size:
    1347 amino acids
    Molecular mass:
    148561 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SPATA31A1 Gene

Proteomics data for SPATA31A1 Gene at MOPED

Post-translational modifications for SPATA31A1 Gene

No Post-translational modifications

Other Protein References for SPATA31A1 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for SPATA31A1 Gene

Domains for SPATA31A1 Gene

Protein Domains for SPATA31A1 Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

S31A1_HUMAN
Family:
  • Belongs to the SPATA31 family.:
    • Q5TZJ5
genes like me logo Genes that share domains with SPATA31A1: view

No data available for Gene Families for SPATA31A1 Gene

Function for SPATA31A1 Gene

Molecular function for SPATA31A1 Gene

UniProtKB/Swiss-Prot Function: May play a role in spermatogenesis.

Phenotypes for SPATA31A1 Gene

GenomeRNAi human phenotypes for SPATA31A1:
genes like me logo Genes that share phenotypes with SPATA31A1: view

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SPATA31A1 Gene

Localization for SPATA31A1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for SPATA31A1 Gene

Membrane; Single-pass membrane protein.

Gene Ontology (GO) - Cellular Components for SPATA31A1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with SPATA31A1: view

Pathways for SPATA31A1 Gene

SuperPathways for SPATA31A1 Gene

No Data Available

Interacting Proteins for SPATA31A1 Gene

Gene Ontology (GO) - Biological Process for SPATA31A1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007283 spermatogenesis IEA --
GO:0030154 cell differentiation IEA --
genes like me logo Genes that share ontologies with SPATA31A1: view

No data available for Pathways by source for SPATA31A1 Gene

Transcripts for SPATA31A1 Gene

mRNA/cDNA for SPATA31A1 Gene

(3) REFSEQ mRNAs :
(0) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SPATA31A1 Gene

SPATA31 subfamily A, member 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SPATA31A1 Gene

No ASD Table

Relevant External Links for SPATA31A1 Gene

GeneLoc Exon Structure for
SPATA31A1
ECgene alternative splicing isoforms for
SPATA31A1

Expression for SPATA31A1 Gene

mRNA expression in normal human tissues for SPATA31A1 Gene

mRNA differential expression in normal tissues according to GTEx for SPATA31A1 Gene

This gene is overexpressed in Testis (51.8).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for SPATA31A1 Gene

SOURCE GeneReport for Unigene cluster for SPATA31A1 Gene Hs.632654

genes like me logo Genes that share expressions with SPATA31A1: view

Orthologs for SPATA31A1 Gene

This gene was present in the common ancestor of mammals.

Orthologs for SPATA31A1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 37
  • 96 (a)
ManyToMany
-- 37
  • 96 (a)
ManyToMany
LOC749578 36
  • 98.39 (n)
  • 96.21 (a)
cow
(Bos Taurus)
Mammalia -- 37
  • 43 (a)
OneToMany
SPATA31A3 36
  • 66.01 (n)
  • 46.71 (a)
dog
(Canis familiaris)
Mammalia -- 37
  • 44 (a)
OneToMany
SPATA31A3 36
  • 65.64 (n)
  • 46.73 (a)
mouse
(Mus musculus)
Mammalia Spata31 36
  • 58.94 (n)
  • 40.75 (a)
Spata31 37
  • 35 (a)
OneToMany
rat
(Rattus norvegicus)
Mammalia Spata31a5 36
  • 59.46 (n)
  • 39.09 (a)
Species with no ortholog for SPATA31A1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SPATA31A1 Gene

ENSEMBL:
Gene Tree for SPATA31A1 (if available)
TreeFam:
Gene Tree for SPATA31A1 (if available)

Paralogs for SPATA31A1 Gene

Paralogs for SPATA31A1 Gene

Selected SIMAP similar genes for SPATA31A1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with SPATA31A1: view

Variants for SPATA31A1 Gene

Sequence variations from dbSNP and Humsavar for SPATA31A1 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type MAF
rs2762438 -- 39,353,720(+) ACTGT(A/G)AATGC upstream-variant-2KB
rs7031811 -- 39,358,850(+) AAATT(A/C)TTTGC missense, reference, utr-variant-5-prime
rs9777066 -- 39,356,531(+) tttgt(G/T)tgtgt intron-variant
rs9777491 -- 39,358,639(+) CGTGC(A/G)CCTTT missense, reference, upstream-variant-2KB
rs10125162 -- 39,358,957(+) AGAAG(C/T)TCTCA reference, missense, synonymous-codon

Relevant External Links for SPATA31A1 Gene

HapMap Linkage Disequilibrium report
SPATA31A1

No data available for Structural Variations from Database of Genomic Variants (DGV) for SPATA31A1 Gene

Disorders for SPATA31A1 Gene

No disorders were found for SPATA31A1 Gene.

No data available for UniProtKB/Swiss-Prot for SPATA31A1 Gene

Publications for SPATA31A1 Gene

  1. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 3 4
  2. The testis-specific VAD1.3/AEP1 interacts with I^-actin and syntaxin 1 and directs peri-nuclear/Golgi expression with bipartite nucleus localization (BNL) sequence. (PMID: 20850414) Zuo Y. … Lee K.F. (Biochem. Biophys. Res. Commun. 2010) 2 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for SPATA31A1 Gene

Sources for SPATA31A1 Gene

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