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Aliases for SPATA3 Gene

Aliases for SPATA3 Gene

  • Spermatogenesis Associated 3 2 3
  • Testis And Spermatogenesis Cell-Related Protein 1 3 4
  • Testis Spermatocyte Apoptosis-Related Protein 1 3 4
  • TSARG1 3 4
  • Testis And Spermatogenesis Cell Apoptosis Related Gene 1 3
  • Spermatogenesis-Associated Protein 3 3
  • C16orf55 6
  • SPATA33 6

External Ids for SPATA3 Gene

Previous GeneCards Identifiers for SPATA3 Gene

  • GC00U991161
  • GC02P232063
  • GC02P231686
  • GC02P231569
  • GC02P231860
  • GC02P223702

Summaries for SPATA3 Gene

GeneCards Summary for SPATA3 Gene

SPATA3 (Spermatogenesis Associated 3) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPATA3 Gene

Genomics for SPATA3 Gene

Regulatory Elements for SPATA3 Gene

Genomic Location for SPATA3 Gene

230,996,121 bp from pter
231,025,056 bp from pter
28,936 bases
Plus strand

Genomic View for SPATA3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SPATA3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPATA3 Gene

Proteins for SPATA3 Gene

  • Protein details for SPATA3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Spermatogenesis-associated protein 3
    Protein Accession:
    Secondary Accessions:
    • Q86WX5
    • Q8N9Y6

    Protein attributes for SPATA3 Gene

    192 amino acids
    Molecular mass:
    20901 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SPATA3 Gene

Proteomics data for SPATA3 Gene at MOPED

Post-translational modifications for SPATA3 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Antibody Products

No data available for DME Specific Peptides for SPATA3 Gene

Domains for SPATA3 Gene

Protein Domains for SPATA3 Gene


Suggested Antigen Peptide Sequences for SPATA3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SPATA3: view

No data available for Gene Families and UniProtKB/Swiss-Prot for SPATA3 Gene

Function for SPATA3 Gene

Gene Ontology (GO) - Molecular Function for SPATA3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
genes like me logo Genes that share ontologies with SPATA3: view

Animal Model Products

miRNA for SPATA3 Gene

miRTarBase miRNAs that target SPATA3

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targets and HOMER Transcription for SPATA3 Gene

Localization for SPATA3 Gene

Subcellular locations from

Jensen Localization Image for SPATA3 Gene COMPARTMENTS Subcellular localization image for SPATA3 gene
Compartment Confidence
nucleus 3
cytosol 1
extracellular 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for SPATA3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005575 cellular_component ND --
genes like me logo Genes that share ontologies with SPATA3: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for SPATA3 Gene

Pathways for SPATA3 Gene

SuperPathways for SPATA3 Gene

No Data Available

Interacting Proteins for SPATA3 Gene

Gene Ontology (GO) - Biological Process for SPATA3 Gene


No data available for Pathways by source for SPATA3 Gene

Transcripts for SPATA3 Gene

Unigene Clusters for SPATA3 Gene

Spermatogenesis associated 3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SPATA3 Gene

No ASD Table

Relevant External Links for SPATA3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SPATA3 Gene

mRNA expression in normal human tissues for SPATA3 Gene

mRNA differential expression in normal tissues according to GTEx for SPATA3 Gene

This gene is overexpressed in Testis (51.6).

SOURCE GeneReport for Unigene cluster for SPATA3 Gene Hs.745178

genes like me logo Genes that share expressions with SPATA3: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for SPATA3 Gene

Orthologs for SPATA3 Gene

This gene was present in the common ancestor of mammals.

Orthologs for SPATA3 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia SPATA3 35
  • 78.77 (n)
  • 70.37 (a)
  • 53 (a)
(Canis familiaris)
Mammalia SPATA3 35
  • 72.28 (n)
  • 59.47 (a)
  • 59 (a)
(Mus musculus)
Mammalia Spata3 35
  • 66.14 (n)
  • 57.14 (a)
Spata3 16
Spata3 36
  • 53 (a)
(Pan troglodytes)
Mammalia SPATA3 35
  • 98.09 (n)
  • 95.83 (a)
  • 96 (a)
(Rattus norvegicus)
Mammalia Spata3 35
  • 70.43 (n)
  • 60.75 (a)
Species with no ortholog for SPATA3:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SPATA3 Gene

Gene Tree for SPATA3 (if available)
Gene Tree for SPATA3 (if available)

Paralogs for SPATA3 Gene

No data available for Paralogs for SPATA3 Gene

Variants for SPATA3 Gene

Sequence variations from dbSNP and Humsavar for SPATA3 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs731837 -- 231,016,965(-) TATGT(A/G)GTATA intron-variant
rs731838 -- 231,016,535(-) gctaa(A/C)cttct intron-variant
rs745902 -- 231,016,064(+) CCCCA(C/T)CCCCA intron-variant
rs745903 -- 231,016,224(+) CCACC(C/T)CCATT intron-variant
rs745904 -- 231,016,334(+) ACGGG(A/G/T)CATTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SPATA3 Gene

Variant ID Type Subtype PubMed ID
nsv875956 CNV Gain 21882294
esv2721608 CNV Deletion 23290073

Relevant External Links for SPATA3 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SPATA3 Gene

Disorders for SPATA3 Gene

(1) University of Copenhagen DISEASES for SPATA3 Gene

Relevant External Links for SPATA3

Genetic Association Database (GAD)
Human Genome Epidemiology (HuGE) Navigator
genes like me logo Genes that share disorders with SPATA3: view

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , Novoseek inferred disease relationships and Genatlas for SPATA3 Gene

Publications for SPATA3 Gene

  1. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 48
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. Molecular cloning for testis spermatogenesis cell apoptosis related gene TSARG1 and Mtsarg1 and expression analysis for Mtsarg1 gene. (PMID: 12812072) Fu J.J. … Liu S.F. (Yi Chuan Xue Bao 2003) 3 4
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  5. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3

Products for SPATA3 Gene

Sources for SPATA3 Gene

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