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Aliases for SPATA19 Gene

Aliases for SPATA19 Gene

  • Spermatogenesis Associated 19 2 3
  • Spermatogenic Cell-Specific Gene 1 Protein 3 4
  • Cancer/Testis Antigen 132 2 3
  • Spergen-1 3 4
  • Spergen1 3 4
  • Spermatogenesis-Associated Protein 19, Mitochondrial 3
  • Spermatogenic Specific-Gene1 3
  • Spergen 1 2
  • CT132 3
  • SPAS1 3

External Ids for SPATA19 Gene

Previous GeneCards Identifiers for SPATA19 Gene

  • GC11M133216
  • GC11M129665

Summaries for SPATA19 Gene

GeneCards Summary for SPATA19 Gene

SPATA19 (Spermatogenesis Associated 19) is a Protein Coding gene.

UniProtKB/Swiss-Prot for SPATA19 Gene

  • May have a role in spermiogenesis

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPATA19 Gene

Genomics for SPATA19 Gene

Regulatory Elements for SPATA19 Gene

Genomic Location for SPATA19 Gene

Start:
133,725,402 bp from pter
End:
133,845,538 bp from pter
Size:
120,137 bases
Orientation:
Minus strand

Genomic View for SPATA19 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SPATA19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPATA19 Gene

Proteins for SPATA19 Gene

  • Protein details for SPATA19 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q7Z5L4-SPT19_HUMAN
    Recommended name:
    Spermatogenesis-associated protein 19, mitochondrial
    Protein Accession:
    Q7Z5L4
    Secondary Accessions:
    • Q8N7A9

    Protein attributes for SPATA19 Gene

    Size:
    167 amino acids
    Molecular mass:
    19186 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SPATA19 Gene

Proteomics data for SPATA19 Gene at MOPED

Post-translational modifications for SPATA19 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for SPATA19 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for SPATA19 Gene

Domains for SPATA19 Gene

Protein Domains for SPATA19 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for SPATA19 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SPATA19: view

No data available for Gene Families and UniProtKB/Swiss-Prot for SPATA19 Gene

Function for SPATA19 Gene

Molecular function for SPATA19 Gene

UniProtKB/Swiss-Prot Function: May have a role in spermiogenesis

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SPATA19 Gene

Localization for SPATA19 Gene

Subcellular locations from UniProtKB/Swiss-Prot for SPATA19 Gene

Mitochondrion outer membrane.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SPATA19 Gene COMPARTMENTS Subcellular localization image for SPATA19 gene
Compartment Confidence
extracellular 2
mitochondrion 2
cytosol 1
endoplasmic reticulum 1
nucleus 1

Gene Ontology (GO) - Cellular Components for SPATA19 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005741 mitochondrial outer membrane IEA --
genes like me logo Genes that share ontologies with SPATA19: view

Pathways for SPATA19 Gene

SuperPathways for SPATA19 Gene

No Data Available

Interacting Proteins for SPATA19 Gene

Gene Ontology (GO) - Biological Process for SPATA19 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007275 multicellular organismal development IEA --
GO:0007283 spermatogenesis IEA --
GO:0030154 cell differentiation IEA --
genes like me logo Genes that share ontologies with SPATA19: view

No data available for Pathways by source for SPATA19 Gene

Transcripts for SPATA19 Gene

mRNA/cDNA for SPATA19 Gene

(16) Selected AceView cDNA sequences:
(2) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SPATA19 Gene

Spermatogenesis associated 19:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SPATA19 Gene

No ASD Table

Relevant External Links for SPATA19 Gene

GeneLoc Exon Structure for
SPATA19
ECgene alternative splicing isoforms for
SPATA19

Expression for SPATA19 Gene

mRNA expression in normal human tissues for SPATA19 Gene

mRNA differential expression in normal tissues according to GTEx for SPATA19 Gene

This gene is overexpressed in Testis (51.6).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for SPATA19 Gene

SOURCE GeneReport for Unigene cluster for SPATA19 Gene Hs.97541

mRNA Expression by UniProt/SwissProt for SPATA19 Gene

Q7Z5L4-SPT19_HUMAN
Tissue specificity: Expressed specifically in testis.
genes like me logo Genes that share expressions with SPATA19: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery for SPATA19 Gene

Orthologs for SPATA19 Gene

This gene was present in the common ancestor of mammals.

Orthologs for SPATA19 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SPATA19 35
  • 99 (n)
  • 98.8 (a)
SPATA19 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SPATA19 35
  • 81.6 (n)
  • 76.62 (a)
SPATA19 36
  • 76 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SPATA19 35
  • 81.6 (n)
  • 77.92 (a)
SPATA19 36
  • 78 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Spata19 35
  • 78.35 (n)
  • 74.03 (a)
Spata19 16
Spata19 36
  • 73 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SPATA19 36
  • 68 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SPATA19 36
  • 55 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Spata19 35
  • 76.19 (n)
  • 69.48 (a)
Species with no ortholog for SPATA19:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SPATA19 Gene

ENSEMBL:
Gene Tree for SPATA19 (if available)
TreeFam:
Gene Tree for SPATA19 (if available)

Paralogs for SPATA19 Gene

No data available for Paralogs for SPATA19 Gene

Variants for SPATA19 Gene

Sequence variations from dbSNP and Humsavar for SPATA19 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs715797 -- 133,826,689(+) TGGTA(C/T)TGTGC intron-variant
rs715798 -- 133,826,734(+) GTTTG(A/T)CCTTG intron-variant
rs748647 -- 133,727,458(-) GCATC(A/G)AATGG intron-variant
rs768507 -- 133,753,526(+) GCCAG(C/G)TCTCC intron-variant
rs1105494 -- 133,828,838(-) AAGAC(G/T)TCTCA intron-variant

Relevant External Links for SPATA19 Gene

HapMap Linkage Disequilibrium report
SPATA19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for SPATA19 Gene

Disorders for SPATA19 Gene

Relevant External Links for SPATA19

Genetic Association Database (GAD)
SPATA19
genes like me logo Genes that share disorders with SPATA19: view

No data available for UniProtKB/Swiss-Prot for SPATA19 Gene

Publications for SPATA19 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Isolation and expression analysis of the human testis-specific gene, SPERGEN-1, a spermatogenic cell-specific gene-1. (PMID: 12688595) Miyamoto T. … Ishikawa M. (J. Assist. Reprod. Genet. 2003) 3 4
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  5. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PMID: 17081983) Olsen J.V. … Mann M. (Cell 2006) 3

Products for SPATA19 Gene

Sources for SPATA19 Gene

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